RPSBLAST alignment of GI: 254780608 and MMDB domain: 1vio_A_58-243

>1vio_A (A:58-243) Ribosomal small subunit pseudouridine synthase A; structural genomics, lyase; 1.59A {Haemophilus influenzae}Length = 186

 Score = 83.8 bits (206), Expect = 3e-17
 Identities = 25/205 (12%), Positives = 53/205 (25%), Gaps = 29/205 (14%)

Query: 103 YEDSKIYVFNKPAGISVQGGSGIAYHIDGFLKSWVDSKGQKPRLTHRLDQETSGILVVAR 162
            E+ + ++ NKP G       G    I  F          K     RLD +T+G++++  
Sbjct: 2   IEEGQYFMLNKPQGCVCSNDDGDYPTIYQFFDYP---LAGKLHSAGRLDVDTTGLVLLTD 58

Query: 163 TRAAAQHLTESFRMRRIQKIYWSLVWGIPKNKKECIANWLLKKSHIGGDYVHVVKQNEKG 222
                     +      +K Y   +    +          +                   
Sbjct: 59  D--GQWSHRITSPKHHCEKTYLVTLADPVEENYSAACAEGILLRGEKEPTKP-------- 108

Query: 223 ANYAISHFKVIDCFAQKFCWLEMQPHTGRTHQLRVHALHMGCPIVGDHKY-CANFKGNFT 281
                               + +    GR HQ++     +G  +VG H++   +   + +
Sbjct: 109 ----------AKLEILDDYNVNLTISEGRYHQVKRMFAALGNKVVGLHRWKIGDVVLDES 158

Query: 282 SPIQ-----NKLYLHARYMDLPHPE 301
                     +  +        H  
Sbjct: 159 LEEGEYRPLTQSEIEKLVEGGSHHH 183