HHsearch alignment for GI: 254780610 and conserved domain: CHL00113
>CHL00113 rps4 ribosomal protein S4; Reviewed.
Probab=98.04 E-value=6.8e-06 Score=54.90 Aligned_cols=54 Identities=26% Similarity=0.308 Sum_probs=46.8
Q ss_pred CCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEEE
Q ss_conf 6875789999871768898999999985990499899328675804898899970
Q gi|254780610|r 21 AEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITV 75 (340)
Q Consensus 21 ~g~RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd~I~i~~ 75 (340)
T Consensus 87 LE~RLDnvVy-RlGfA~Tr~~ARQlV~HgHi~VNgkkVnIPSy~vk~GDvI~v~~ 140 (201)
T CHL00113 87 LEMRLDNILF-RLGMAPTIPAARQLVNHGHILVNGRIVDIPSYRCKPRDIITIKD 140 (201)
T ss_pred HHHHHHHHHH-HCCCCCCHHHHHHEEECCEEEECCEEECCCCEEEECCCEEEECC
T ss_conf 9999999998-70540588876105846629989989337875842799899753