HHsearch alignment for GI: 254780610 and conserved domain: COG2302

>COG2302 Uncharacterized conserved protein, contains S4-like domain [Function unknown].

Probab=98.13  E-value=5.6e-06  Score=55.42  Aligned_cols=54  Identities=24%  Similarity=0.313  Sum_probs=47.7

Q ss_pred             HHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEE
Q ss_conf             13687578999987176889899999998599049989932867580489889997
Q gi|254780610|r   19 STAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLIT   74 (340)
Q Consensus        19 ~~~g~RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd~I~i~   74 (340)
T Consensus       177 ~vsSlRLD~vis~~~--~~SR~~a~~lIe~g~VkVN~k~v~~~s~~v~~GDliSir  230 (257)
T COG2302         177 TVSSLRLDVVISEGF--GLSRAKAQQLIEKGKVKVNWKVVDKASYEVQEGDLISIR  230 (257)
T ss_pred             EEEHHHHHHHHHHHH--HHHHHHHHHHHHCCCEEEEEEEECCCCCEECCCCEEEEE
T ss_conf             421240799999887--655999999877373277129912666332249899984