HHsearch alignment for GI: 254780610 and conserved domain: PRK00020

Probab=97.26  E-value=0.00057  Score=43.45  Aligned_cols=70  Identities=21%  Similarity=0.384  Sum_probs=49.6

Q ss_pred             CEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHC
Q ss_conf             02789962401110456787542100222222102443344443643244443323240572120357888899999721
Q gi|254780610|r   97 DDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHG  176 (340)
Q Consensus        97 ~~llvinKPaGl~vhp~~~~~~~tl~~~l~~~~~~~~~~~~~~~~~~lVHRLDr~TSGlll~Ak~~~a~~~l~~~f~~~~  176 (340)
T Consensus        10 ~G~l~idKP~G~TS~--------~vv~~vkk~l~~--------kKvGH~GTLDP~AtGvLiv~vG~a--TKl~~~~~---   68 (244)
T PRK00020         10 DGVLLLDKPVGLSSN--------HALQRAKRTVDA--------AKAGHTGTLDPFATGLLVCCMGRA--TKISGRML---   68 (244)
T ss_pred             CEEEEEECCCCCCHH--------HHHHHHHHHHCC--------CCCCCCCCCCCCCCCEEEEEECHH--HHHHHHHC---
T ss_conf             779997169989989--------999999998298--------715778667975514189996737--67659766---


Q ss_pred             CCCCEEEEEEEEEE
Q ss_conf             13221334454320
Q gi|254780610|r  177 KSTRLKRAYYAMVW  190 (340)
Q Consensus       177 ~~~~v~K~Y~Aiv~  190 (340)
T Consensus        69 ---~~~K~Y~a~i~   79 (244)
T PRK00020         69 ---EADKTYQATLQ   79 (244)
T ss_pred             ---CCCCEEEEEEE
T ss_conf             ---89927999999