HHsearch alignment for GI: 254780610 and conserved domain: PRK00130

Probab=97.11  E-value=0.00093  Score=42.17  Aligned_cols=70  Identities=21%  Similarity=0.315  Sum_probs=49.2

Q ss_pred             CEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHC
Q ss_conf             02789962401110456787542100222222102443344443643244443323240572120357888899999721
Q gi|254780610|r   97 DDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHG  176 (340)
Q Consensus        97 ~~llvinKPaGl~vhp~~~~~~~tl~~~l~~~~~~~~~~~~~~~~~~lVHRLDr~TSGlll~Ak~~~a~~~l~~~f~~~~  176 (340)
T Consensus         2 ~G~l~i~KP~g~TS~--------~vv~~vkk~l~~--------kKvGH~GTLDP~AtGvL~v~~G~a--TK~~~~~~---   60 (289)
T PRK00130          2 NGVINVYKPKGMTSF--------DVVRKIRKIAKI--------KKVGHTGTLDPLASGVLPVCLGKA--TKIVDYIM---   60 (289)
T ss_pred             CEEEEEECCCCCCHH--------HHHHHHHHHHCC--------CCCCCCCCCCCCCCCEEEEEECHH--HHHHHHHC---
T ss_conf             779996089999989--------999999998488--------855778467985604289997877--61436767---


Q ss_pred             CCCCEEEEEEEEEE
Q ss_conf             13221334454320
Q gi|254780610|r  177 KSTRLKRAYYAMVW  190 (340)
Q Consensus       177 ~~~~v~K~Y~Aiv~  190 (340)
T Consensus        61 ---~~~K~Y~a~~~   71 (289)
T PRK00130         61 ---EGKKVYRVELK   71 (289)
T ss_pred             ---CCCEEEEEEEE
T ss_conf             ---99907999999