HHsearch alignment for GI: 254780610 and conserved domain: pfam06353
>pfam06353 DUF1062 Protein of unknown function (DUF1062). This family consists of several hypothetical bacterial proteins of unknown function.
Probab=95.53 E-value=0.037 Score=32.67 Aligned_cols=49 Identities=33% Similarity=0.325 Sum_probs=41.6
Q ss_pred CCHHCCCEEEEEECHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEEC
Q ss_conf 511016249999571136875789999871768898999999985990499
Q gi|254780610|r 4 TLDNCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISIN 54 (340)
Q Consensus 4 ~~~~~~~~~~~~V~~~~~g~RLD~~L~~~l~~~~sR~~i~kli~~G~V~vn 54 (340)
T Consensus 84 ~~~~~~~i~I~i~~~~~~~~Rl~~Lla~~L--~lSrs~l~~l~~~G~i~~~ 132 (142)
T pfam06353 84 GIASHAAIEIQLRLEFPFSLRLDRLLAEEL--GLSRSRLQRLIDQGQIRGV 132 (142)
T ss_pred CCCCCCCEEEEEECCCCCCCCHHHHHHHHH--CCCHHHHHHHHHCCCEECC
T ss_conf 777777669999627877642999999881--8689999999988987705