HHsearch alignment of GI: 254780610 and MMDB domain: 1c05_A_77-159

>1c05_A (A:77-159) Ribosomal protein S4 delta 41; two subdomains, unique topology, possible helix-turn-helix motif; NMR {Bacillus stearothermophilus}
Probab=92.86  E-value=0.095  Score=29.80  Aligned_cols=25  Identities=24%  Similarity=0.503  Sum_probs=23.2

Q ss_pred             CEEECCEEECCCCCEECCCCEEEEE
Q ss_conf             9049989932867580489889997
Q gi|254780610|r   50 FISINGMVSKNPNRKVVPGDSFLIT   74 (340)
Q Consensus        50 ~V~vnG~~~~~~~~~l~~gd~I~i~   74 (340)
                      +|.|||+++.-|++.+++||.|.+.
T Consensus         1 Hi~VNgkkVdIPSy~~k~gD~I~ik   25 (83)
T 1c05_A            1 HILVDGSRVNIPSYRVKPGQTIAVR   25 (83)
T ss_dssp             CEEETTEECCCSSCBCCTTCEEEEC
T ss_pred             CEECCCEEEEECCEEECCCCEEEEC
T ss_conf             6360436998434162178487502