HHsearch results for GI: 254780610 and protein with PDBid: 3kbg_A
>3kbg_A 30S ribosomal protein S4E; RPS4E, RS4E_theac, TAR28, NESG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.75A {Thermoplasma acidophilum}
Probab=94.17 E-value=0.083 Score=29.25 Aligned_cols=70 Identities=17% Similarity=0.227 Sum_probs=53.4
Q ss_pred CCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEEECCCHHCCHHHHHHHHHHCCCCCEEEE
Q ss_conf 87578999987176889899999998599049989932867580489889997056011110233222221014402789
Q gi|254780610|r 22 EGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITVPAAQKLNIAQENIPLDILYEDDDIIV 101 (340)
Q Consensus 22 g~RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd~I~i~~~~~~~~~~~~~~~~~~IlyED~~llv 101 (340)
+.-|--||...|.-..+.+.+++.+.+|.|.|||++.++..+.+-.-|.|++. . + .++++|.....++
T Consensus 7 siPL~iiLRd~Lk~A~t~rEak~Il~~~~V~VDGkvr~d~k~PvGlmDVisi~--~--------e--~yRv~~d~kgr~~ 74 (213)
T 3kbg_A 7 SVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFMDVIEIN--G--------E--SYRVVYNDQGALV 74 (213)
T ss_dssp CEEHHHHHHHHHHTTTCGGGHHHHHHTTCEEETTEECCCTTCEECTTCEEEET--T--------E--EEEEEECTTSCEE
T ss_pred CCCEEHHHHHHHCCCCCHHHHHHHHHCCEEEECCEEECCCCCCCCEEEEEEEC--C--------C--EEEEEECCCCEEE
T ss_conf 66540553135341265799999986893898999964489987437899978--9--------8--7999986996199
Q ss_pred EE
Q ss_conf 96
Q gi|254780610|r 102 IN 103 (340)
Q Consensus 102 in 103 (340)
+.
T Consensus 75 ~~ 76 (213)
T 3kbg_A 75 LM 76 (213)
T ss_dssp EE
T ss_pred EE
T ss_conf 99