HHSEARCH alignment of GI: 254780610 and SCOP domain: d1jh3a_

Alignment

Probab=94.99  E-value=0.031  Score=30.39  Aligned_cols=56  Identities=14%  Similarity=0.099  Sum_probs=39.2

Q ss_pred             EEEEEECHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCC
Q ss_conf             49999571136875789999871768898999999985990499899328675804898
Q gi|254780610|r   11 IKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGD   69 (340)
Q Consensus        11 ~~~~~V~~~~~g~RLD~~L~~~l~~~~sR~~i~kli~~G~V~vnG~~~~~~~~~l~~gd   69 (340)
                      +-.+.+..+  +..|-.+|... .-.-|++.++++|++|.|+|||+++.++++.+..+|
T Consensus        22 ~p~~~~~~~--~~~l~~ll~~~-~l~~S~seaRrlI~~ggv~iN~~kv~d~~~~l~~~~   77 (99)
T d1jh3a_          22 VPSFVHEGG--DVPLVELLVSA-GISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEH   77 (99)
T ss_dssp             SCEEEECSS--CCCHHHHHHHH-TSCCSHHHHHHHHHSTTEEETTEECCSTTTCCSSTT
T ss_pred             CCCEEECCC--CCCHHHHHHHC-CCCCCHHHHHHHHHCCCEEECCEEECCCCCCCCHHH
T ss_conf             980796589--98799999984-887688999999985998999999328122017757

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain
domain: Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]