Probab=99.89 E-value=9.3e-24 Score=158.63 Aligned_cols=144 Identities=19% Similarity=0.301 Sum_probs=97.0
Q ss_pred EEEEECCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCC
Q ss_conf 78996240111045678754210022222210244334444364324444332324057212035788889999972113
Q gi|254780610|r 99 IIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKS 178 (340)
Q Consensus 99 llvinKPaGl~vhp~~~~~~~tl~~~l~~~~~~~~~~~~~~~~~~lVHRLDr~TSGlll~Ak~~~a~~~l~~~f~~~~~~ 178 (340)
++++|||+|+.|+...... .++.+.+... ...+.++|||||++|||+|||+.+...++.|... .
T Consensus 3 yi~lNKP~G~l~s~~~~~~-~~~~~~l~~~---------~~~~l~~vgRLD~~tsGLlL~tndg~~~~~l~~~------~ 66 (172)
T d1kska4 3 YFMLNKPQGYVCSTDDPDH-PTVLYFLDEP---------VAWKLHAAGRLDIDTTGLVLMTDDGQWSHRITSP------R 66 (172)
T ss_dssp EEEEEECTTCBSSSSCSSS-CBGGGGCCCT---------TGGGCEESSCCCTTCEEEEEEESCHHHHHHHHCT------T
T ss_pred EEEEECCCCEEECCCCCCC-CCEEEECCCC---------CCCCEEEEECCCCCCCCCEEEECCCCEEEEECCC------C
T ss_conf 9999899978979739899-9378865752---------3676789613786003639990456415431122------3
Q ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCEEEEEECHHHHH
Q ss_conf 22133445432024332332110013434443322123444555553000012221011256677500123443115899
Q gi|254780610|r 179 TRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTH 258 (340)
Q Consensus 179 ~~v~K~Y~Aiv~G~~~~~~g~i~~~l~~~~~~~~~~~~~~~~~~~~k~a~T~~~~l~~~~~~~~~~~slv~~~~~TGRtH 258 (340)
..+.|.|+|.|.|.+..+.. + ..+..+ ..++..+.+.+..++.... +.+++.+.|||+|
T Consensus 67 ~~i~k~Y~v~v~~~i~~~~~--~---------~l~~gv----~i~~~~~~~~~~~v~~~~~------~~l~i~l~~Gr~~ 125 (172)
T d1kska4 67 HHCEKTYLVTLESPVADDTA--E---------QFAKGV----QLHNEKDLTKPAVLEVITP------TQVRLTISEGRYH 125 (172)
T ss_dssp SCCCEEEEEEESSCCCTTHH--H---------HHHHCC----CCTTCSSCCCCCEEEEEET------TEEEEEESCCCTT
T ss_pred CCCCEEEEEEEECCCCHHHH--H---------HHHCCE----EECCCCCCCCCEEEEECCC------CEEEEEEECCCCH
T ss_conf 24627999998226897898--8---------863655----7768511115258851467------5999999448538
Q ss_pred HHHHHHHHHCCEEEC--CCCCCC
Q ss_conf 999999870978604--154477
Q gi|254780610|r 259 QIRVHMAHKGNPLIG--DPLYGK 279 (340)
Q Consensus 259 QIRvhla~lG~PIvG--D~~YG~ 279 (340)
|||.||+++||||+. -..||+
T Consensus 126 qIR~~~~~lg~~V~~L~Rv~~G~ 148 (172)
T d1kska4 126 QVKRMFAAVGNHVVELHRERIGG 148 (172)
T ss_dssp HHHHHHHHTTCCEEEEEEEEETT
T ss_pred HHHHHHHHCCCEEEEEEEEEECC
T ss_conf 99999997598894999999836
class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase RsuA/RluD
domain: Ribosomal small subunit pseudouridine 516 synthase RsuA
species: Escherichia coli [TaxId: 562]