Probab=100.00 E-value=0 Score=428.79 Aligned_cols=224 Identities=33% Similarity=0.487 Sum_probs=185.7 Q ss_pred HHCCCCCEEEEEECCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH Q ss_conf 21014402789962401110456787542100222222102443344443643244443323240572120357888899 Q gi|254780610|r 91 DILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSE 170 (340) Q Consensus 91 ~IlyED~~llvinKPaGl~vhp~~~~~~~tl~~~l~~~~~~~~~~~~~~~~~~lVHRLDr~TSGlll~Ak~~~a~~~l~~ 170 (340) .||||||+|+|||||+||+|||+++...++ ++.+..+.. ....+++||||||+||||||||||+.+++.|++ T Consensus 2 ~IlyeD~~ilvvnKP~gl~~h~~~~~~~~~-~~~l~~~~~-------~~~~~~~vHRLD~~TSGlll~Ak~~~~~~~l~~ 73 (227) T d1v9ka_ 2 VIMYEDDHILVLNKPSGTAVHGGSGLSFGV-IEGLRALRP-------EARFLELVHRLDRDTSGVLLVAKKRSALRSLHE 73 (227) T ss_dssp CEEEECSSEEEEEECTTSCSSCCSSSBCCH-HHHHHHHST-------TCSCCEESSCCCTTCEEEEEEESSHHHHHHHHH T ss_pred EEEEECCCEEEEECCCCCCCCCCCCCCCHH-HHHHHHHCC-------CCCCCCEEEECCCEEEEEEEEECCHHHHHHHHH T ss_conf 799967999999999998648998995359-999998677-------876531563224202004665155699999999 Q ss_pred HHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCEEEE Q ss_conf 99972113221334454320243323321100134344433221234445555530000122210112566775001234 Q gi|254780610|r 171 QFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKC 250 (340) Q Consensus 171 ~f~~~~~~~~v~K~Y~Aiv~G~~~~~~g~i~~~l~~~~~~~~~~~~~~~~~~~~k~a~T~~~~l~~~~~~~~~~~slv~~ 250 (340) +|+ ++.+.|+|+|+|.|.++...++++.|+..+......+.+ .....|++|.|.|++++.+. .+||++| T Consensus 74 ~f~----~~~v~K~Y~a~~~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~gk~a~t~~~~l~~~~-----~~slv~~ 142 (227) T d1v9ka_ 74 QLR----EKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIV--RVSQEGKPSETRFKVEERYA-----FATLVRC 142 (227) T ss_dssp HHH----TTCSEEEEEEEEESCCCTTCCEECCCEEEEECTTSCEEE--EECTTSBCCCEEEEEEEECS-----SEEEEEE T ss_pred HHH----CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE--ECCCCCCCCCEEEHHHHHCC-----CCEEEEE T ss_conf 986----056642011123576312367522330013321102555--20789801205620455258-----7379999 Q ss_pred EECHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHCEEEEECCCCCCEEEEECCCCHHH Q ss_conf 43115899999999870978604154477554443345701355440798044321000424688976899984997899 Q gi|254780610|r 251 HLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPRNNQDMDFQVPIPEDM 330 (340) Q Consensus 251 ~~~TGRtHQIRvhla~lG~PIvGD~~YG~~~~~~~~~~~~~~~~~~~~~~r~~LHA~~l~f~hP~t~~~~~f~aplP~~~ 330 (340) +|+||||||||+||+++|||||||.+||+.... ........+++||+|||++|+|.||.||+.++|+||+|++| T Consensus 143 ~~~TGRtHQIRvHla~lG~PIvGD~~Yg~~~~~------~~~~~~~~~~~rl~LHa~~L~f~hP~t~~~~~~~aplP~~f 216 (227) T d1v9ka_ 143 SPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFD------RQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGL 216 (227) T ss_dssp EESSCCTTHHHHHHHHTTCCBTTCTTTSCHHHH------HHHHHTTCCCCSCCEEEEEEEEECTTTCCEEEEECCCCHHH T ss_pred EECCCCHHHHHHHHHHCCCEECCCCCCCCCCCC------CCCHHCCCCCCHHHHHCCCCEEECCCCCCEEEEEECCCHHH T ss_conf 946573478877776459533467603131124------30000146864378871502918899998899992691999 Q ss_pred HHHHHHHHC Q ss_conf 999998851 Q gi|254780610|r 331 LTVIRKLNE 339 (340) Q Consensus 331 ~~~l~~L~~ 339 (340) ..+|++|+. T Consensus 217 ~~~l~~Lk~ 225 (227) T d1v9ka_ 217 KRCLQKMRN 225 (227) T ss_dssp HHHHHHHHH T ss_pred HHHHHHHHH T ss_conf 999999874
class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase RsuA/RluD
domain: Ribosomal large subunit pseudouridine synthase C, RluC
species: Escherichia coli [TaxId: 562]