BLAST/PSIBLAST alignment of GI: 254780610 and GI: 315121810 at iteration 1
>gi|315121810|ref|YP_004062299.1| RNA-pseudouridylate synthase protein, ribosomal large subunit D [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 340
>gi|313495212|gb|ADR51811.1| RNA-pseudouridylate synthase protein, ribosomal large subunit D [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 340
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/339 (79%), Positives = 299/339 (88%)
Query: 1 MQQTLDNCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKN 60
MQ DNC +KISLL+++ AEGRIDRWLA +LKE+FSRSYVK LILNG ISING+VS N
Sbjct: 1 MQTASDNCLPMKISLLANNEAEGRIDRWLAINLKEKFSRSYVKTLILNGAISINGVVSIN 60
Query: 61 PNRKVVPGDSFLITVPAAQKLNIAQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGT 120
P+RKVVPG+SF I VP Q+LNIA ENIPLDILYEDDDIIVINK AGLVVHPAPGNWTGT
Sbjct: 61 PSRKVVPGESFFIDVPQLQQLNIAAENIPLDILYEDDDIIVINKQAGLVVHPAPGNWTGT 120
Query: 121 LVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTR 180
LVNALL+HC+NNLS ING+KRPGIVHRLDKDTTG MVVAKND+AHQ+LSEQF DHG
Sbjct: 121 LVNALLHHCNNNLSGINGIKRPGIVHRLDKDTTGTMVVAKNDIAHQRLSEQFADHGLHMG 180
Query: 181 LKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKN 240
LKR+YYAMVWG+P PDSG INAPLGRCKSNRLRRAVK I+DKT D A+T YQT+EIYNKN
Sbjct: 181 LKRSYYAMVWGVPSPDSGTINAPLGRCKSNRLRRAVKRIEDKTGDRAVTRYQTVEIYNKN 240
Query: 241 SNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLA 300
SNFA SLL+C LETGRTHQIRVHMAHKG P+IGDPLYGKGFKTK NIVN++ KSAILSLA
Sbjct: 241 SNFAASLLRCDLETGRTHQIRVHMAHKGYPIIGDPLYGKGFKTKENIVNHSTKSAILSLA 300
Query: 301 RQALHAHSLSFSHPRNNQDMDFQVPIPEDMLTVIRKLNE 339
RQALHA+SLSF+HP N+DM+F+ PIPEDM VI++L E
Sbjct: 301 RQALHAYSLSFTHPCKNKDMNFKTPIPEDMSNVIKELKE 339