BLAST/PSIBLAST alignment of GI: 254780610 and GI: 315121810 at iteration 1
>gi|315121810|ref|YP_004062299.1| RNA-pseudouridylate synthase protein, ribosomal large subunit D [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 340
>gi|313495212|gb|ADR51811.1| RNA-pseudouridylate synthase protein, ribosomal large subunit D [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 340
 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 268/339 (79%), Positives = 299/339 (88%)

Query: 1   MQQTLDNCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKN 60
           MQ   DNC  +KISLL+++ AEGRIDRWLA +LKE+FSRSYVK LILNG ISING+VS N
Sbjct: 1   MQTASDNCLPMKISLLANNEAEGRIDRWLAINLKEKFSRSYVKTLILNGAISINGVVSIN 60

Query: 61  PNRKVVPGDSFLITVPAAQKLNIAQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGT 120
           P+RKVVPG+SF I VP  Q+LNIA ENIPLDILYEDDDIIVINK AGLVVHPAPGNWTGT
Sbjct: 61  PSRKVVPGESFFIDVPQLQQLNIAAENIPLDILYEDDDIIVINKQAGLVVHPAPGNWTGT 120

Query: 121 LVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTR 180
           LVNALL+HC+NNLS ING+KRPGIVHRLDKDTTG MVVAKND+AHQ+LSEQF DHG    
Sbjct: 121 LVNALLHHCNNNLSGINGIKRPGIVHRLDKDTTGTMVVAKNDIAHQRLSEQFADHGLHMG 180

Query: 181 LKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKN 240
           LKR+YYAMVWG+P PDSG INAPLGRCKSNRLRRAVK I+DKT D A+T YQT+EIYNKN
Sbjct: 181 LKRSYYAMVWGVPSPDSGTINAPLGRCKSNRLRRAVKRIEDKTGDRAVTRYQTVEIYNKN 240

Query: 241 SNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLA 300
           SNFA SLL+C LETGRTHQIRVHMAHKG P+IGDPLYGKGFKTK NIVN++ KSAILSLA
Sbjct: 241 SNFAASLLRCDLETGRTHQIRVHMAHKGYPIIGDPLYGKGFKTKENIVNHSTKSAILSLA 300

Query: 301 RQALHAHSLSFSHPRNNQDMDFQVPIPEDMLTVIRKLNE 339
           RQALHA+SLSF+HP  N+DM+F+ PIPEDM  VI++L E
Sbjct: 301 RQALHAYSLSFTHPCKNKDMNFKTPIPEDMSNVIKELKE 339