BLAST/PSIBLAST alignment of GI: 254780610 and GI: 86358939 at iteration 1
>gi|86358939|ref|YP_470831.1| pseudouridylate synthase, ribosomal large subunit D protein [Rhizobium etli CFN 42] Length = 354
>gi|86283041|gb|ABC92104.1| pseudouridylate synthase, ribosomal large subunit D protein [Rhizobium etli CFN 42] Length = 354
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/334 (56%), Positives = 241/334 (72%), Gaps = 2/334 (0%)
Query: 7 NCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVV 66
+ I+ L +D TAEGR+D WL + E FSRS +K LI +G +S+ G +P RKV
Sbjct: 20 QAAGIRKVLTADETAEGRLDAWLTAQVGEDFSRSRIKALIKDGQVSLRGEQVTDPQRKVR 79
Query: 67 PGDSFLITVPAAQKLNIAQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALL 126
GDSF IT+P + E+IPL+IL+EDDD+IVI+KPAGLVVHP GNWTGTLVNAL+
Sbjct: 80 VGDSFEITLPEPEDPTPKGEDIPLEILHEDDDLIVISKPAGLVVHPGSGNWTGTLVNALI 139
Query: 127 YHCHNNLSSINGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYY 186
+HC + LS I GV+RPGIVHRLDKDTTGVMVVAKND+AH+ LS QF DHG++ L+RAY
Sbjct: 140 HHCGDTLSGIGGVRRPGIVHRLDKDTTGVMVVAKNDVAHRHLSLQFADHGRTMPLERAYR 199
Query: 187 AMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFA-- 244
A+VWG P SG I+APLGR +R RRAVK D + AD+AITHY+ IE + +N +
Sbjct: 200 AVVWGRPRTLSGTIDAPLGRATGDRTRRAVKRPDSQDADAAITHYEVIERFQENPDATAL 259
Query: 245 VSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLARQAL 304
SL++CHLETGRTHQIRVHMAH G+PL+GD +YG GF+TKAN++ + + RQAL
Sbjct: 260 ASLVECHLETGRTHQIRVHMAHIGHPLVGDTVYGAGFRTKANLLPEEIRKVVNGFGRQAL 319
Query: 305 HAHSLSFSHPRNNQDMDFQVPIPEDMLTVIRKLN 338
HA L F HPR + M F+VP+P+DM+ ++ L
Sbjct: 320 HAFMLQFEHPRTGELMHFEVPLPDDMVKLVAALR 353