RPSBLAST alignment for GI: 254780610 and conserved domain: pfam00849

>gnl|CDD|144443 pfam00849, PseudoU_synth_2, RNA pseudouridylate synthase. Members of this family are involved in modifying bases in RNA molecules. They carry out the conversion of uracil bases to pseudouridine. This family includes RluD, a pseudouridylate synthase that converts specific uracils to pseudouridine in 23S rRNA. RluA from E. coli converts bases in both rRNA and tRNA. Length = 151

 Score =  132 bits (334), Expect = 1e-31
 Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 19/169 (11%)

Query: 99  IIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLS-SINGVKRPGIVHRLDKDTTGVMV 157
            IV+NKPAG+ VHP   +         L      L  +  G  R   VHRLD+DT+G+++
Sbjct: 1   YIVVNKPAGVPVHPTDLS--------DLLSLTELLLVAELGKFRLYPVHRLDRDTSGLLL 52

Query: 158 VAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVK 217
           +AK+  A  KL++ F +      +++ Y A+V   P  + G I AP+ + K+   RR  +
Sbjct: 53  LAKDGEAANKLNKLFPERK----VEKEYLALV-DGPEEEEGTIKAPIKKDKNKVPRRKKE 107

Query: 218 GIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAH 266
            +D K    A+TH + +   +K  +  VSL++  L TGR HQIR H+A 
Sbjct: 108 ELDGK---KAVTHLRVLRSGSKIED--VSLVELELVTGRKHQIRAHLAA 151