RPSBLAST alignment for GI: 254780610 and conserved domain: PRK11025

>gnl|CDD|182909 PRK11025, PRK11025, 23S rRNA pseudouridylate synthase C; Provisional. Length = 317
 Score =  124 bits (313), Expect = 3e-29
 Identities = 107/352 (30%), Positives = 161/352 (45%), Gaps = 57/352 (16%)

Query: 7   NCSSIKISLLSDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVV 66
              S+KI  +S   A  RID +L T LK    +S +  ++  G + +N    K P  K+ 
Sbjct: 4   ETPSVKIVTISADEAGQRIDNFLRTQLK-GVPKSMIYRILRKGEVRVNKKRIK-PEYKLE 61

Query: 67  PGDSFLI---------TVPAAQKLN-IAQENIPLDILYEDDDIIVINKPAGLVVHPAPGN 116
            GD   I             + KL  +A   +   ILYEDD I+V+NKP+G  VH   G 
Sbjct: 62  AGDEVRIPPVRVAEREEEAVSPKLQKVAA--LADVILYEDDHILVLNKPSGTAVHGGSGL 119

Query: 117 WTGTLVNALLYHCHNNLSSINGVK--RPG-----IVHRLDKDTTGVMVVAKNDLAHQKLS 169
             G                I G++  RP      +VHRLD+DT+GV++VAK   A + L 
Sbjct: 120 SFGV---------------IEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLH 164

Query: 170 EQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRRAVKGIDDKTADSAIT 229
           EQ  + G    +++ Y A+V G       ++ APL +       R V+ +  +   S  T
Sbjct: 165 EQLREKG----MQKDYLALVRGQWQSHVKVVQAPLLKNILQSGERIVR-VSQEGKPSE-T 218

Query: 230 HYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIGDPLYG-KGFKTKANIV 288
            ++  E Y     FA +L++    TGRTHQIRVH  + G+P+  D  YG + F       
Sbjct: 219 RFKVEERYA----FA-TLVRASPVTGRTHQIRVHTQYAGHPIAFDDRYGDREF------- 266

Query: 289 NNNAKSAILSLARQALHAHSLSFSHPRNNQDMDFQVPIPEDMLTVIRKLNEK 340
             + +     L R  LHA +L F+HP   + M  + P+ E +   ++KL   
Sbjct: 267 --DQQLTGTGLNRLFLHAAALKFTHPGTGEVMRIEAPLDEQLKRCLQKLRNA 316