RPSBLAST alignment for GI: 254780610 and conserved domain: COG0564

>gnl|CDD|30910 COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]. Length = 289
 Score =  296 bits (760), Expect = 5e-81
 Identities = 143/313 (45%), Positives = 199/313 (63%), Gaps = 31/313 (9%)

Query: 17  SDSTAEGRIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITVP 76
            +  A  R+D++LA  L    SRS ++ LI  G + +NG   K P+ K+ PGD   I +P
Sbjct: 7   PEEEAGQRLDKFLAKLLP--ISRSRIQKLIRKGRVRVNGKKVK-PSYKLKPGDVVRIPLP 63

Query: 77  -AAQKLNIAQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSS 135
              ++  +  E+IPLDILYED+D++V+NKPAGLVVHP  G+  GTLVNALL HC +    
Sbjct: 64  EEPEEEKLVPEDIPLDILYEDEDLLVVNKPAGLVVHPGGGHHEGTLVNALLRHCQDG--- 120

Query: 136 INGVKRPGIVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLP 195
              V+RPGIVHRLDKDT+G+++VAKN  A ++LSEQF       ++K+ Y A+V G    
Sbjct: 121 ---VERPGIVHRLDKDTSGLLLVAKNREAARELSEQFKQR----KVKKTYLALVRGHLPE 173

Query: 196 DSGIINAPLGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETG 255
           D G I+AP+GR   NR + AV  + + +   AITHY+ +E +  N     +L++   ETG
Sbjct: 174 DEGTIDAPIGRDPKNRKKMAV--VKEGSGKPAITHYEVLERFGDN----YTLVELKPETG 227

Query: 256 RTHQIRVHMAHKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPR 315
           RTHQIRVH+AH G+P++GDPLYG              KSA   L RQALHA+ LSF+HP 
Sbjct: 228 RTHQIRVHLAHLGHPIVGDPLYG-----------GKDKSAGAGLKRQALHAYKLSFTHPL 276

Query: 316 NNQDMDFQVPIPE 328
             ++++F+ P+PE
Sbjct: 277 TGEELEFEAPLPE 289