RPSBLAST alignment of GI: 254780610 and MMDB domain: 3dh3_A_64-290

>3dh3_A (A:64-290) Ribosomal large subunit pseudouridine synthase F; protein-RNA complex, S4 domain, alpha/beta protein, isomerase, RNA-binding, rRNA processing; HET: FHU; 3.00A {Escherichia coli}Length = 227
 Score =  138 bits (349), Expect = 7e-34
 Identities = 36/251 (14%), Positives = 70/251 (27%), Gaps = 49/251 (19%)

Query: 95  EDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIVHRLDKDTTG 154
           ED  +I +NKP G+V     G     +V+ + +            KR   + RLDKD+ G
Sbjct: 2   EDLVLIALNKPVGIVSTTEDGERD-NIVDFVNHS-----------KRVFPIGRLDKDSQG 49

Query: 155 VMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLGRCKSNRLRR 214
           ++ +  +     K+     DH      ++ Y   V      +     +            
Sbjct: 50  LIFLTNHGDLVNKILRAGNDH------EKEYLVTVDKPITEEFIRGMSAGVPI------- 96

Query: 215 AVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMAHKGNPLIGD 274
                             T+    K    A  + +  L  G   QIR    H G  +   
Sbjct: 97  ----------------LGTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKL 140

Query: 275 PLYGKGFKTKAN--------IVNNNAKSAILSLARQALHAHSLSFSHPRNNQDMDFQVPI 326
                   + +         + ++        +   +      + + P+        V +
Sbjct: 141 ERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKPKAKAKPKTAGIKRPVVKM 200

Query: 327 PEDMLTVIRKL 337
            +      R  
Sbjct: 201 EKTAEKGGRPA 211