RPSBLAST alignment of GI: 254780610 and protein with PDBid: 3dh3

>3dh3_A Ribosomal large subunit pseudouridine synthase F; protein-RNA complex, S4 domain, alpha/beta protein, isomerase, RNA-binding, rRNA processing; HET: FHU; 3.00A {Escherichia coli} Length = 290

 Score = 64.4 bits (156), Expect = 4e-11
 Identities = 38/249 (15%), Positives = 74/249 (29%), Gaps = 55/249 (22%)

Query: 24  RIDRWLATSLKEQFSRSYVKILILNGFISINGMVSKNPNRKVVPGDSFLITVPAAQKLNI 83
           R++++++ S     SR      I  G + +NG  +     +V PGD   + V        
Sbjct: 8   RLNKYISESG--ICSRREADRYIEQGNVFLNGKRAT-IGDQVKPGDV--VKV-------- 54

Query: 84  AQENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPG 143
              N  L    E +D+++I     + +     +     +   + H           KR  
Sbjct: 55  ---NGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHS----------KRVF 101

Query: 144 IVHRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAP 203
            + RLDKD+ G++ +  +     K+                               ++ P
Sbjct: 102 PIGRLDKDSQGLIFLTNHGDLVNKI-----------------LRAGNDHEKEYLVTVDKP 144

Query: 204 LGRCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVH 263
           +       +   V  +   T    +                  + +  L  G   QIR  
Sbjct: 145 ITEEFIRGMSAGVPILGTVTKKCKVKKEAP------------FVFRITLVQGLNRQIRRM 192

Query: 264 MAHKGNPLI 272
             H G  + 
Sbjct: 193 CEHFGYEVK 201