RPSBLAST alignment of GI: 254780610 and SCOP domain: d1v9fa_

Alignment

 Score =  183 bits (464), Expect = 2e-47
 Identities = 104/253 (41%), Positives = 141/253 (55%), Gaps = 19/253 (7%)

Query: 86  ENIPLDILYEDDDIIVINKPAGLVVHPAPGNWTGTLVNALLYHCHNNLSSINGVKRPGIV 145
           ++IPLDI+YED+DII+INKP  LVVHP  GN  GT++NALL++       I  V R GIV
Sbjct: 4   QDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYY----PPIADVPRAGIV 59

Query: 146 HRLDKDTTGVMVVAKNDLAHQKLSEQFVDHGKSTRLKRAYYAMVWGIPLPDSGIINAPLG 205
           HRLDKDTTG+MVVAK   A  +L E               Y  V    +   G ++ P+ 
Sbjct: 60  HRLDKDTTGLMVVAKTVPAQTRLVESLQRRE-----ITREYEAVAIGHMTAGGTVDEPIS 114

Query: 206 RCKSNRLRRAVKGIDDKTADSAITHYQTIEIYNKNSNFAVSLLKCHLETGRTHQIRVHMA 265
           R  + R   AV          A+THY+ +E +  +     + L+  LETGRTHQIRVHMA
Sbjct: 115 RHPTKRTHMAV----HPMGKPAVTHYRIMEHFRVH-----TRLRLRLETGRTHQIRVHMA 165

Query: 266 HKGNPLIGDPLYGKGFKTKANIVNNNAKSAILSLARQALHAHSLSFSHPRNNQDMDFQVP 325
           H  +PL+GDP+YG   +      +    S +    RQALHA  L   HP +  +M++  P
Sbjct: 166 HITHPLVGDPVYGGRPRPPKGA-SEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAP 224

Query: 326 IPEDMLTVIRKLN 338
           IP+DM+ +I  + 
Sbjct: 225 IPQDMVELIEVMR 237

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Pseudouridine synthase
superfamily: Pseudouridine synthase
family: Pseudouridine synthase RsuA/RluD
domain: Ribosomal large subunit pseudouridine synthase D, RluD
species: Escherichia coli [TaxId: 562]