HHsearch alignment for GI: 254780611 and conserved domain: COG1342
>COG1342 Predicted DNA-binding proteins [General function prediction only].
Probab=94.83 E-value=0.098 Score=31.13 Aligned_cols=50 Identities=20% Similarity=0.244 Sum_probs=41.7
Q ss_pred CCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999982788888989999997789999999999999999999997
Q gi|254780611|r 235 LNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQESIQK 286 (302)
Q Consensus 235 L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR~~l~~ 286 (302)
T Consensus 34 lt~eElEAlRLvD~~~--l~QeeAA~rMgISr~Tfwr~l~sAR~KvA~aLve 83 (99)
T COG1342 34 LTIEELEALRLVDYEG--LTQEEAALRMGISRQTFWRLLTSARKKVADALVE 83 (99)
T ss_pred ECHHHHHHHHHHHHHH--CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 2299988999886861--0578999984642999999999999999999855