HHsearch alignment for GI: 254780611 and conserved domain: COG1342

>COG1342 Predicted DNA-binding proteins [General function prediction only].
Probab=94.83  E-value=0.098  Score=31.13  Aligned_cols=50  Identities=20%  Similarity=0.244  Sum_probs=41.7

Q ss_pred             CCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999982788888989999997789999999999999999999997
Q gi|254780611|r  235 LNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQESIQK  286 (302)
Q Consensus       235 L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR~~l~~  286 (302)
T Consensus        34 lt~eElEAlRLvD~~~--l~QeeAA~rMgISr~Tfwr~l~sAR~KvA~aLve   83 (99)
T COG1342          34 LTIEELEALRLVDYEG--LTQEEAALRMGISRQTFWRLLTSARKKVADALVE   83 (99)
T ss_pred             ECHHHHHHHHHHHHHH--CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             2299988999886861--0578999984642999999999999999999855