HHsearch alignment for GI: 254780611 and conserved domain: COG3355
>COG3355 Predicted transcriptional regulator [Transcription].
Probab=92.46 E-value=0.66 Score=25.60 Aligned_cols=47 Identities=19% Similarity=0.362 Sum_probs=21.6
Q ss_pred HHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 996219999999999982788888989999997789999999999999999
Q gi|254780611|r 230 RSMSVLNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKV 280 (302)
Q Consensus 230 ~~l~~L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kL 280 (302)
T Consensus 20 ~c~~GLs~~Dv~v~~~LL~~~~~~tvdelae~lnr~rStv----~rsl~~L 66 (126)
T COG3355 20 KCVYGLSELDVEVYKALLEENGPLTVDELAEILNRSRSTV----YRSLQNL 66 (126)
T ss_pred HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHH----HHHHHHH
T ss_conf 9993896889999999986469957999999978319999----9999999