HHsearch alignment for GI: 254780611 and conserved domain: COG3413

>COG3413 Predicted DNA binding protein [General function prediction only].

Probab=97.08  E-value=0.0023  Score=41.99  Aligned_cols=52  Identities=23%  Similarity=0.307  Sum_probs=42.5

Q ss_pred             CCCHHHHHHHHHHH--C-CCCC--CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             19999999999982--7-8888--898999999778999999999999999999999
Q gi|254780611|r  234 VLNPRERRIFEARR--L-QENP--VTLENLSSEFEVSRERVRQIEARAFKKVQESIQ  285 (302)
Q Consensus       234 ~L~~rEr~II~~ry--~-~~~~--~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR~~l~  285 (302)
T Consensus       155 ~LTdrQ~~vL~~A~~~GYFd~PR~~~l~dLA~~lGISkst~~ehLRrAe~Kl~~~~~  211 (215)
T COG3413         155 DLTDRQLEVLRLAYKMGYFDYPRRVSLKDLAKELGISKSTLSEHLRRAERKLIEAYF  211 (215)
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             699999999999998589888765899999999599888999999999999999975