HHsearch alignment for GI: 254780611 and conserved domain: COG4566
>COG4566 TtrR Response regulator [Signal transduction mechanisms].
Probab=96.33 E-value=0.034 Score=34.16 Aligned_cols=57 Identities=19% Similarity=0.370 Sum_probs=41.7
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 779999996219999999999982788888989999997789999999999999999999
Q gi|254780611|r 224 RRNMLTRSMSVLNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQES 283 (302)
Q Consensus 224 ~~~~L~~~l~~L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR~~ 283 (302)
T Consensus 132 ~~~~~~~~l~tLT~RERqVl~~vV---~G~~NKqIA~dLgiS~rTVe~HRanvM~Km~a~ 188 (202)
T COG4566 132 RQAAIRARLATLTPRERQVLDLVV---RGLMNKQIAFDLGISERTVELHRANVMEKMQAR 188 (202)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHH---CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 899999999866988999999998---376308999983986645999999999997333