HHsearch alignment for GI: 254780611 and conserved domain: PRK10360
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional.
Probab=96.74 E-value=0.0052 Score=39.65 Aligned_cols=45 Identities=22% Similarity=0.352 Sum_probs=39.0
Q ss_pred HCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 219999999999982788888989999997789999999999999999
Q gi|254780611|r 233 SVLNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKV 280 (302)
Q Consensus 233 ~~L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kL 280 (302)
T Consensus 136 ~~LT~RE~eVL~lia---~G~snkeIA~~L~IS~~TVk~h~~~i~~KL 180 (196)
T PRK10360 136 DPLTKRERQVAEKLA---QGMAVKEIAAELGLSPKTVHVHRANLMEKL 180 (196)
T ss_pred CCCCHHHHHHHHHHH---CCCCHHHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf 899979999999998---799999999996999999999999999981