HHsearch alignment for GI: 254780611 and conserved domain: PRK10651
>PRK10651 transcriptional regulator NarL; Provisional.
Probab=96.82 E-value=0.0044 Score=40.15 Aligned_cols=47 Identities=19% Similarity=0.374 Sum_probs=39.6
Q ss_pred HHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 62199999999999827888889899999977899999999999999999
Q gi|254780611|r 232 MSVLNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQ 281 (302)
Q Consensus 232 l~~L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR 281 (302)
T Consensus 153 ~~~LT~RE~eVL~ll~---~G~snkeIA~~L~iS~~TV~~h~~~i~~KLg 199 (216)
T PRK10651 153 VNQLTPRERDILKLIA---QGLSNKMIARRLDITESTVKVHVKHMLKKMK 199 (216)
T ss_pred CCCCCHHHHHHHHHHH---CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
T ss_conf 2348989999999998---5999999999969789999999999999848