HHsearch alignment for GI: 254780611 and conserved domain: PRK13870
>PRK13870 transcriptional regulator TraR; Provisional.
Probab=96.28 E-value=0.016 Score=36.32 Aligned_cols=45 Identities=22% Similarity=0.248 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999999998278888898999999778999999999999999999
Q gi|254780611|r 235 LNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQE 282 (302)
Q Consensus 235 L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR~ 282 (302)
T Consensus 174 LT~RE~E~L~W~---A~GKT~~EIA~ILgISe~TV~fHl~na~~KL~a 218 (234)
T PRK13870 174 LDPKEATYLRWI---AVGMTMEEIADVEGVKYNSVRVKLREAMKRFDV 218 (234)
T ss_pred CCHHHHHHHHHH---HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
T ss_conf 997999999999---789989999999798899999999999999589