HHsearch alignment for GI: 254780611 and conserved domain: smart00419
>smart00419 HTH_CRP helix_turn_helix, cAMP Regulatory protein.
Probab=91.47 E-value=0.29 Score=27.94 Aligned_cols=28 Identities=21% Similarity=0.476 Sum_probs=22.9
Q ss_pred CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 88898999999778999999999999999999
Q gi|254780611|r 251 NPVTLENLSSEFEVSRERVRQIEARAFKKVQE 282 (302)
Q Consensus 251 ~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR~ 282 (302)
T Consensus 7 l~lt~~~iA~~lG~tretvsR~----l~~l~~ 34 (48)
T smart00419 7 LPLTRQEIAELLGLTRETVSRT----LKRLEK 34 (48)
T ss_pred ECCCHHHHHHHHCCCHHHHHHH----HHHHHH
T ss_conf 3379999999979979999999----999998