HHsearch alignment for GI: 254780611 and conserved domain: smart00421

>smart00421 HTH_LUXR helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon

Probab=96.92  E-value=0.0028  Score=41.42  Aligned_cols=46  Identities=20%  Similarity=0.380  Sum_probs=39.5

Q ss_pred             HCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf             2199999999999827888889899999977899999999999999999
Q gi|254780611|r  233 SVLNPRERRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQ  281 (302)
Q Consensus       233 ~~L~~rEr~II~~ry~~~~~~Tl~EIa~~lgiS~eRVrQI~~~AL~kLR  281 (302)
T Consensus         2 ~~LT~rE~~il~~l~---~G~s~~eIA~~L~is~~TV~~~~~~i~~Kl~   47 (58)
T smart00421        2 ASLTPREREVLRLLA---EGLTNKEIAERLGISEKTVKTHLSNIMRKLG   47 (58)
T ss_pred             CCCCHHHHHHHHHHH---HCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
T ss_conf             761899999999998---1799999998989789899999999999848