BLAST/PSIBLAST alignment of GI: 254780611 and GI: 86358940 at iteration 1
>gi|86358940|ref|YP_470832.1| RNA polymerase factor sigma-32 [Rhizobium etli CFN 42] Length = 302
>gi|86283042|gb|ABC92105.1| RNA polymerase sigma factor protein (sigma-70) [Rhizobium etli CFN 42] Length = 302
 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 211/288 (73%), Positives = 246/288 (85%)

Query: 1   MNRKNMSIIVNGEIGLSRYIHEIRKIPMLEKQEEYVLAKRYREHGDLSAAHRLVTSHLRL 60
           M R  +  I  GE GL+RY+ EIRK PMLE Q+EY+LAKRY EHGD  AAH+LVTSHLRL
Sbjct: 1   MARNTLPSITAGEAGLNRYLDEIRKFPMLEPQQEYMLAKRYAEHGDRDAAHKLVTSHLRL 60

Query: 61  VVKIAMGYRGYGLPISEVVSEGNIGLMQAVKKFDPERGFRLATYSMWWIKAAMQEYILRS 120
           V KIAMGYRGYGLPI EVVSEGN+GLMQAVKKFDPERGFRLATY+MWWIKA++QEYILRS
Sbjct: 61  VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS 120

Query: 121 WSLVKIGTTANQKRLFFNLRRLKGHLQAITDNNLKPEQVVAIAKKLNVSESEVISMNCRL 180
           WS VK+GTTANQKRLFFNLRRLKG +QAI D +LKPE V  IA KLNVSE EVISMN RL
Sbjct: 121 WSAVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVSEIATKLNVSEEEVISMNRRL 180

Query: 181 AGDESLNALINSSDKNSSQWQDWLVYDHDGQEQVLIEKEERKNRRNMLTRSMSVLNPRER 240
           +GD SLNA I +++ +S QWQDWLV DH+ QE VLIE++E + RR ML ++MSVLN RER
Sbjct: 181 SGDASLNAPIKAAEGDSGQWQDWLVDDHESQEDVLIEQDELETRRRMLAKAMSVLNERER 240

Query: 241 RIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQESIQKQV 288
           RIFEARRL E+PVTLE+LS+EF++SRERVRQIE RAF+KVQ++++K+ 
Sbjct: 241 RIFEARRLAEDPVTLEDLSAEFDISRERVRQIEVRAFEKVQDAVRKEA 288