BLAST/PSIBLAST alignment of GI: 254780611 and GI: 86358940 at iteration 1
>gi|86358940|ref|YP_470832.1| RNA polymerase factor sigma-32 [Rhizobium etli CFN 42] Length = 302
>gi|86283042|gb|ABC92105.1| RNA polymerase sigma factor protein (sigma-70) [Rhizobium etli CFN 42] Length = 302
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/288 (73%), Positives = 246/288 (85%)
Query: 1 MNRKNMSIIVNGEIGLSRYIHEIRKIPMLEKQEEYVLAKRYREHGDLSAAHRLVTSHLRL 60
M R + I GE GL+RY+ EIRK PMLE Q+EY+LAKRY EHGD AAH+LVTSHLRL
Sbjct: 1 MARNTLPSITAGEAGLNRYLDEIRKFPMLEPQQEYMLAKRYAEHGDRDAAHKLVTSHLRL 60
Query: 61 VVKIAMGYRGYGLPISEVVSEGNIGLMQAVKKFDPERGFRLATYSMWWIKAAMQEYILRS 120
V KIAMGYRGYGLPI EVVSEGN+GLMQAVKKFDPERGFRLATY+MWWIKA++QEYILRS
Sbjct: 61 VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS 120
Query: 121 WSLVKIGTTANQKRLFFNLRRLKGHLQAITDNNLKPEQVVAIAKKLNVSESEVISMNCRL 180
WS VK+GTTANQKRLFFNLRRLKG +QAI D +LKPE V IA KLNVSE EVISMN RL
Sbjct: 121 WSAVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVSEIATKLNVSEEEVISMNRRL 180
Query: 181 AGDESLNALINSSDKNSSQWQDWLVYDHDGQEQVLIEKEERKNRRNMLTRSMSVLNPRER 240
+GD SLNA I +++ +S QWQDWLV DH+ QE VLIE++E + RR ML ++MSVLN RER
Sbjct: 181 SGDASLNAPIKAAEGDSGQWQDWLVDDHESQEDVLIEQDELETRRRMLAKAMSVLNERER 240
Query: 241 RIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQESIQKQV 288
RIFEARRL E+PVTLE+LS+EF++SRERVRQIE RAF+KVQ++++K+
Sbjct: 241 RIFEARRLAEDPVTLEDLSAEFDISRERVRQIEVRAFEKVQDAVRKEA 288