RPSBLAST alignment for GI: 254780611 and conserved domain: PRK05901
>gnl|CDD|180310 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional. Length = 509
Score = 79.3 bits (196), Expect = 1e-15
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 26/120 (21%)
Query: 19 YIHEIRKIPMLEKQEEYVLAKR----------YREHGDLSAAHR---------------- 52
Y+ +I K+ +L +EE LAKR E L R
Sbjct: 216 YLKQIGKVKLLNAEEEVELAKRIEAGLYAEELLAEGEKLDPELRRDLQWIGRDGKRAKNH 275
Query: 53 LVTSHLRLVVKIAMGYRGYGLPISEVVSEGNIGLMQAVKKFDPERGFRLATYSMWWIKAA 112
L+ ++LRLVV +A Y GL +++ EGN+GL++AV+KFD +G++ +TY+ WWI+ A
Sbjct: 276 LLEANLRLVVSLAKRYTNRGLSFLDLIQEGNLGLIKAVEKFDYTKGYKFSTYATWWIRQA 335