RPSBLAST alignment for GI: 254780611 and conserved domain: PRK06288

>gnl|CDD|180512 PRK06288, PRK06288, RNA polymerase sigma factor WhiG; Reviewed. Length = 268
 Score = 54.3 bits (131), Expect = 4e-08
 Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 21/260 (8%)

Query: 24  RKIPMLEKQEEYVLAKRYREHGDLSAAHRLVTSHLRLVVKIAMGYRGYGLP----ISEVV 79
            KIP   +Q+E  L + Y++ GD      L+  +  LV  +A G    G+P      ++V
Sbjct: 7   GKIPKYAQQDETELWREYKKTGDPKIREYLILKYSPLVKYVA-GRIAVGMPQNVEFDDLV 65

Query: 80  SEGNIGLMQAVKKFDPERGFRLATYSMWWIKAAMQEYILRSWSLVKIGTTANQKRLFFNL 139
           S G  GL+ A++KFDPER  +  TY++  I+ A+ +  LR  S+  I  +  QK     +
Sbjct: 66  SYGVFGLIDAIEKFDPEREIKFKTYAVTRIRGAIFDE-LR--SIDWIPRSVRQKAR--QI 120

Query: 140 RRLKGHLQAITDNNLKPEQVVAIAKKLNVSESEVISMNCRLAGDE--SLNALINSSDKNS 197
            R    L+A        E+   IA +L +S  E  S+  +L+G    SLN L    D+  
Sbjct: 121 ERAIAMLEARLGRTPSDEE---IADELGISLEEYNSLLSKLSGTSVVSLNDLWFGGDEGD 177

Query: 198 S-QWQDWLVYDHDGQEQVLIEKEERKNRRNMLTRSMSVLNPRERRIFEARRLQENPVTLE 256
                D L          + E+EE K    ++  ++  L  RE+++      ++  +TL+
Sbjct: 178 EVSLMDTLESPAALNPDEIAEREEIK---RVIVEAIKTLPEREKKVLILYYYED--LTLK 232

Query: 257 NLSSEFEVSRERVRQIEARA 276
            +     V+  R+ Q+  +A
Sbjct: 233 EIGKVLGVTESRISQLHTKA 252