RPSBLAST alignment for GI: 254780611 and conserved domain: PRK06288
>gnl|CDD|180512 PRK06288, PRK06288, RNA polymerase sigma factor WhiG; Reviewed. Length = 268
Score = 54.3 bits (131), Expect = 4e-08
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 21/260 (8%)
Query: 24 RKIPMLEKQEEYVLAKRYREHGDLSAAHRLVTSHLRLVVKIAMGYRGYGLP----ISEVV 79
KIP +Q+E L + Y++ GD L+ + LV +A G G+P ++V
Sbjct: 7 GKIPKYAQQDETELWREYKKTGDPKIREYLILKYSPLVKYVA-GRIAVGMPQNVEFDDLV 65
Query: 80 SEGNIGLMQAVKKFDPERGFRLATYSMWWIKAAMQEYILRSWSLVKIGTTANQKRLFFNL 139
S G GL+ A++KFDPER + TY++ I+ A+ + LR S+ I + QK +
Sbjct: 66 SYGVFGLIDAIEKFDPEREIKFKTYAVTRIRGAIFDE-LR--SIDWIPRSVRQKAR--QI 120
Query: 140 RRLKGHLQAITDNNLKPEQVVAIAKKLNVSESEVISMNCRLAGDE--SLNALINSSDKNS 197
R L+A E+ IA +L +S E S+ +L+G SLN L D+
Sbjct: 121 ERAIAMLEARLGRTPSDEE---IADELGISLEEYNSLLSKLSGTSVVSLNDLWFGGDEGD 177
Query: 198 S-QWQDWLVYDHDGQEQVLIEKEERKNRRNMLTRSMSVLNPRERRIFEARRLQENPVTLE 256
D L + E+EE K ++ ++ L RE+++ ++ +TL+
Sbjct: 178 EVSLMDTLESPAALNPDEIAEREEIK---RVIVEAIKTLPEREKKVLILYYYED--LTLK 232
Query: 257 NLSSEFEVSRERVRQIEARA 276
+ V+ R+ Q+ +A
Sbjct: 233 EIGKVLGVTESRISQLHTKA 252