RPSBLAST alignment for GI: 254780611 and conserved domain: PRK06596
>gnl|CDD|180635 PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed. Length = 284
Score = 459 bits (1184), Expect = e-130
Identities = 139/287 (48%), Positives = 187/287 (65%), Gaps = 6/287 (2%)
Query: 1 MNRKNMSIIVNGEIGLSRYIHEIRKIPMLEKQEEYVLAKRYREHGDLSAAHRLVTSHLRL 60
M + + ++ E L YI + KIPML +EEY+LAKR REHGDL AA +LV SHLR
Sbjct: 1 MTKALQLLALSPEGNLDAYIQAVNKIPMLTAEEEYMLAKRLREHGDLEAAKQLVLSHLRF 60
Query: 61 VVKIAMGYRGYGLPISEVVSEGNIGLMQAVKKFDPERGFRLATYSMWWIKAAMQEYILRS 120
VV IA GYRGYGLP ++++ EGNIGLM+AVK+FDPE G RL ++++ WIKA + EYILR+
Sbjct: 61 VVHIARGYRGYGLPQADLIQEGNIGLMKAVKRFDPEVGVRLVSFAVHWIKAEIHEYILRN 120
Query: 121 WSLVKIGTTANQKRLFFNLRRLKGHLQAITDNNLKPEQVVAIAKKLNVSESEVISMNCRL 180
W +VK+ TT Q++LFFNLR+ K L L PE+V +A++L VSE EV M RL
Sbjct: 121 WRIVKVATTKAQRKLFFNLRKAKKRLGW-----LNPEEVEMVAEELGVSEEEVREMESRL 175
Query: 181 AG-DESLNALINSSDKNSSQWQDWLVYDHDGQEQVLIEKEERKNRRNMLTRSMSVLNPRE 239
+G D SL+A I+ D+ S QD+L VL E RR +L ++ L+ R
Sbjct: 176 SGQDASLDAPIDDDDEESGAPQDYLEDKSSDPADVLEEDNWEDQRRALLADALEGLDERS 235
Query: 240 RRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQESIQK 286
R I EAR L ++ TL+ L++E+ VS ERVRQIE A KK++ +I+
Sbjct: 236 RDIIEARWLDDDKSTLQELAAEYGVSAERVRQIEKNAMKKLKAAIEA 282