RPSBLAST alignment for GI: 254780611 and conserved domain: PRK06596

>gnl|CDD|180635 PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed. Length = 284
 Score =  459 bits (1184), Expect = e-130
 Identities = 139/287 (48%), Positives = 187/287 (65%), Gaps = 6/287 (2%)

Query: 1   MNRKNMSIIVNGEIGLSRYIHEIRKIPMLEKQEEYVLAKRYREHGDLSAAHRLVTSHLRL 60
           M +    + ++ E  L  YI  + KIPML  +EEY+LAKR REHGDL AA +LV SHLR 
Sbjct: 1   MTKALQLLALSPEGNLDAYIQAVNKIPMLTAEEEYMLAKRLREHGDLEAAKQLVLSHLRF 60

Query: 61  VVKIAMGYRGYGLPISEVVSEGNIGLMQAVKKFDPERGFRLATYSMWWIKAAMQEYILRS 120
           VV IA GYRGYGLP ++++ EGNIGLM+AVK+FDPE G RL ++++ WIKA + EYILR+
Sbjct: 61  VVHIARGYRGYGLPQADLIQEGNIGLMKAVKRFDPEVGVRLVSFAVHWIKAEIHEYILRN 120

Query: 121 WSLVKIGTTANQKRLFFNLRRLKGHLQAITDNNLKPEQVVAIAKKLNVSESEVISMNCRL 180
           W +VK+ TT  Q++LFFNLR+ K  L       L PE+V  +A++L VSE EV  M  RL
Sbjct: 121 WRIVKVATTKAQRKLFFNLRKAKKRLGW-----LNPEEVEMVAEELGVSEEEVREMESRL 175

Query: 181 AG-DESLNALINSSDKNSSQWQDWLVYDHDGQEQVLIEKEERKNRRNMLTRSMSVLNPRE 239
           +G D SL+A I+  D+ S   QD+L         VL E      RR +L  ++  L+ R 
Sbjct: 176 SGQDASLDAPIDDDDEESGAPQDYLEDKSSDPADVLEEDNWEDQRRALLADALEGLDERS 235

Query: 240 RRIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQESIQK 286
           R I EAR L ++  TL+ L++E+ VS ERVRQIE  A KK++ +I+ 
Sbjct: 236 RDIIEARWLDDDKSTLQELAAEYGVSAERVRQIEKNAMKKLKAAIEA 282