RPSBLAST alignment for GI: 254780611 and conserved domain: PRK07670
>gnl|CDD|181075 PRK07670, PRK07670, RNA polymerase sigma factor SigD; Validated. Length = 251
Score = 42.0 bits (99), Expect = 2e-04
Identities = 64/281 (22%), Positives = 127/281 (45%), Gaps = 63/281 (22%)
Query: 33 EEYVLAKRYREHGDLSAAHRLVTSHLRLVV----KIAMGYRGYGLPIS----EVVSEGNI 84
EE L R++E D AA L+ ++ LV +I++G LP S ++ S G +
Sbjct: 7 EEQKLWDRWKEERDPDAADELIRRYMPLVHYHVQRISVG-----LPKSVSKDDLKSLGML 61
Query: 85 GLMQAVKKFDPERGFRLATYSMWWIKAAM------QEYILRSWSLVKIGTTANQKRLFFN 138
GL A++KFDP R + TY+ + I+ A+ ++++ RS K K++
Sbjct: 62 GLYDALEKFDPSRDLKFDTYASFRIRGAIIDGLRKEDWLPRS-MREKT------KKVEAA 114
Query: 139 LRRLKGHLQAITDNNLKPEQVVAIAKKLNVSESEV------------ISMNCRLAG-DES 185
+ +L+ N+ P++V A +L ++E EV +S++ + D+
Sbjct: 115 IEKLEQRYM----RNVTPKEV---AAELGMTEEEVEATMNEGFFANLLSIDEKTHDQDDG 167
Query: 186 LNALINSSDKNSSQWQDWLVYDHDGQEQVLIEKEERKNRRNMLTRSMSVLNPRERRIFEA 245
N + D + ++ L+ ++ LIE+ L + L+ +E+ +
Sbjct: 168 ENVSVTIRDDKTPTPEEKLL------KEELIEE---------LAEKIKQLSEKEQLVISL 212
Query: 246 RRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQESIQK 286
+E +TL + +S R+ QI ++A K+++ ++K
Sbjct: 213 FYKEE--LTLTEIGQVLNLSTSRISQIHSKALFKLKKLLEK 251