RPSBLAST alignment for GI: 254780611 and conserved domain: PRK07670

>gnl|CDD|181075 PRK07670, PRK07670, RNA polymerase sigma factor SigD; Validated. Length = 251
 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 64/281 (22%), Positives = 127/281 (45%), Gaps = 63/281 (22%)

Query: 33  EEYVLAKRYREHGDLSAAHRLVTSHLRLVV----KIAMGYRGYGLPIS----EVVSEGNI 84
           EE  L  R++E  D  AA  L+  ++ LV     +I++G     LP S    ++ S G +
Sbjct: 7   EEQKLWDRWKEERDPDAADELIRRYMPLVHYHVQRISVG-----LPKSVSKDDLKSLGML 61

Query: 85  GLMQAVKKFDPERGFRLATYSMWWIKAAM------QEYILRSWSLVKIGTTANQKRLFFN 138
           GL  A++KFDP R  +  TY+ + I+ A+      ++++ RS    K       K++   
Sbjct: 62  GLYDALEKFDPSRDLKFDTYASFRIRGAIIDGLRKEDWLPRS-MREKT------KKVEAA 114

Query: 139 LRRLKGHLQAITDNNLKPEQVVAIAKKLNVSESEV------------ISMNCRLAG-DES 185
           + +L+         N+ P++V   A +L ++E EV            +S++ +    D+ 
Sbjct: 115 IEKLEQRYM----RNVTPKEV---AAELGMTEEEVEATMNEGFFANLLSIDEKTHDQDDG 167

Query: 186 LNALINSSDKNSSQWQDWLVYDHDGQEQVLIEKEERKNRRNMLTRSMSVLNPRERRIFEA 245
            N  +   D  +   ++ L+      ++ LIE+         L   +  L+ +E+ +   
Sbjct: 168 ENVSVTIRDDKTPTPEEKLL------KEELIEE---------LAEKIKQLSEKEQLVISL 212

Query: 246 RRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQESIQK 286
              +E  +TL  +     +S  R+ QI ++A  K+++ ++K
Sbjct: 213 FYKEE--LTLTEIGQVLNLSTSRISQIHSKALFKLKKLLEK 251