RPSBLAST alignment for GI: 254780611 and conserved domain: PRK08583
>gnl|CDD|181489 PRK08583, PRK08583, RNA polymerase sigma factor SigB; Validated. Length = 257
Score = 58.6 bits (142), Expect = 2e-09
Identities = 64/272 (23%), Positives = 124/272 (45%), Gaps = 40/272 (14%)
Query: 29 LEKQEEYVLAKRYREHGDLSAAHRLVTSHLRLVVKIAMGYRGYGLPISE-VVSEGNIGLM 87
L K+E Y+E+ D A +LV + LV +A Y G E +V G +GL+
Sbjct: 10 LTKEEVNKWIAEYQENQDEEAQEKLVKHYKNLVESLAYKY-SKGQSHHEDLVQVGMVGLL 68
Query: 88 QAVKKFDPERGFRLATYSMWWIKAAMQEYIL-RSWS------LVKIGTTANQKRLFFNLR 140
A++++DP G +++ I ++ Y+ ++WS + ++G
Sbjct: 69 GAIRRYDPSFGRSFEAFAVPTIIGEIKRYLRDKTWSVHVPRRIKELGP------------ 116
Query: 141 RLKGHLQAITDNNLKPEQVVAIAKKLNVSESEVISMNCRLAGDESLNAL-INSSDKNSSQ 199
++K + +T + ++ IA +L VSE EV+ + +S AL ++ S + S
Sbjct: 117 KIKKAVDELTTELQRSPKISEIADRLGVSEEEVLEA---MEMGKSYQALSVDHSIEADSD 173
Query: 200 WQDWLVYDHDGQEQVLIEKEERKNRRNMLTRSMSVLNPRERRIFEARRLQENPVTLENLS 259
+ D GQ++ + E +R +L + + VL+ RE+ I + +ENLS
Sbjct: 174 GSTVTLLDIVGQQE---DGYELTEQRMILEKILPVLSDREKSIIQC-------TFIENLS 223
Query: 260 SE-----FEVSRERVRQIEARAFKKVQESIQK 286
+ +S+ V +++ +A KK++E+
Sbjct: 224 QKETGERLGISQMHVSRLQRQAIKKLREAAFL 255