HHsearch alignment for GI: 254780614 and conserved domain: PRK00571
>PRK00571 atpC F0F1 ATP synthase subunit epsilon; Validated.
Probab=100.00 E-value=2e-33 Score=229.44 Aligned_cols=118 Identities=32% Similarity=0.496 Sum_probs=110.1
Q ss_pred CCEEEEEEECCCCEEECCEEEEEEEEECCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCCEEEEECCEEEEEE
Q ss_conf 44026999848863752213199996057335776898002667068807996268840354226756999499699998
Q gi|254780614|r 4 VNDLHFELVSPEKCVFSGEVQSVVLPSELGDITVLVGHAPVLTTIKSGIVTISLSCEEIHRYVVIGGICDIVPSHCTVLS 83 (135)
Q Consensus 4 ~~~~~l~ivtP~~~i~~~~v~~v~~p~~~G~~gILp~H~p~i~~L~~G~i~i~~~~~~~~~~~V~gG~~~v~~~~v~Il~ 83 (135)
T Consensus 1 M~t~~l~IvtP~~~~~~~~v~~V~lp~~~G~~giLp~H~p~it~L~~G~l~i~~~~g~~~~~~v~gG~~~v~~n~v~Ila 80 (135)
T PRK00571 1 MMTLTVDIVSPEGSIFSGEVEEVVVPGTEGELGILPGHAPLLTALKPGVVRIKKADGEEESIAVSGGFLEVQPDKVTVLA 80 (135)
T ss_pred CCEEEEEEECCCCEEEEEEEEEEEEECCCCCHHHHHHCCCCEEECCCCCEEEEECCCEEEEEEECCEEEEEECCEEEEEE
T ss_conf 96479999969852885468899995685176322331650265259808999669909999996739999899999996
Q ss_pred ECCEEHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 11220768599999999999999965078889999999
Q gi|254780614|r 84 ETILPMDNACLQALEKRIDEVCSDLNNICDVDQRFQME 121 (135)
Q Consensus 84 ~~a~~~~~iD~~~a~~~~e~a~~~l~~~~~~~~~~~~~ 121 (135)
T Consensus 81 ~~a~~~~eId~~~a~~~~~~Ae~~l~~~~~~~e~~~a~ 118 (135)
T PRK00571 81 DSAERADDIDEARAEEAKERAEEALENAHDDVDYARAQ 118 (135)
T ss_pred HHEEEHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 21380524999999999999999986088868999999