HHsearch alignment for GI: 254780614 and conserved domain: PRK01474

>PRK01474 atpC F0F1 ATP synthase subunit epsilon; Validated.
Probab=99.98  E-value=7.1e-32  Score=219.74  Aligned_cols=109  Identities=19%  Similarity=0.433  Sum_probs=103.7

Q ss_pred             CCCEEEEEEECCCCEEECCEEEEEEEEECCCEEEECCCCCEEEEECCCCEEEEEECC--CCEEEEECCCCEEEEECCEEE
Q ss_conf             444026999848863752213199996057335776898002667068807996268--840354226756999499699
Q gi|254780614|r    3 LVNDLHFELVSPEKCVFSGEVQSVVLPSELGDITVLVGHAPVLTTIKSGIVTISLSC--EEIHRYVVIGGICDIVPSHCT   80 (135)
Q Consensus         3 M~~~~~l~ivtP~~~i~~~~v~~v~~p~~~G~~gILp~H~p~i~~L~~G~i~i~~~~--~~~~~~~V~gG~~~v~~~~v~   80 (135)
T Consensus         1 M~~t~~l~IVTPe~~v~~~ev~~V~vPg~eG~~GILp~Haplit~L~~G~v~v~~~~~~~~~~~~~V~GGfveV~~n~vt   80 (112)
T PRK01474          1 MNETILVKIITPLSIAFEKQAKMVTMPGEEGMFGVLPSHVPMIVSLKAGLVQVYIDDMHKPENTYLISGGVTEVTGSYIN   80 (112)
T ss_pred             CCCCEEEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEECCCEEEECCCEEE
T ss_conf             99835999999980477136579999887507002678611165531858999986899947999987869998199899


Q ss_pred             EEEECCEEHHHCCHHHHHHHHHHHHHHHHHC
Q ss_conf             9981122076859999999999999996507
Q gi|254780614|r   81 VLSETILPMDNACLQALEKRIDEVCSDLNNI  111 (135)
Q Consensus        81 Il~~~a~~~~~iD~~~a~~~~e~a~~~l~~~  111 (135)
T Consensus        81 ILad~A~~~~did~~~~~~~~~~ae~~L~~~  111 (112)
T PRK01474         81 IATETAINVTNLSEAEIATKLLDLQKTLSDQ  111 (112)
T ss_pred             EEEHHEEECCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             9933308904599999999999999987547