HHsearch alignment for GI: 254780614 and conserved domain: PRK01474
>PRK01474 atpC F0F1 ATP synthase subunit epsilon; Validated.
Probab=99.98 E-value=7.1e-32 Score=219.74 Aligned_cols=109 Identities=19% Similarity=0.433 Sum_probs=103.7
Q ss_pred CCCEEEEEEECCCCEEECCEEEEEEEEECCCEEEECCCCCEEEEECCCCEEEEEECC--CCEEEEECCCCEEEEECCEEE
Q ss_conf 444026999848863752213199996057335776898002667068807996268--840354226756999499699
Q gi|254780614|r 3 LVNDLHFELVSPEKCVFSGEVQSVVLPSELGDITVLVGHAPVLTTIKSGIVTISLSC--EEIHRYVVIGGICDIVPSHCT 80 (135)
Q Consensus 3 M~~~~~l~ivtP~~~i~~~~v~~v~~p~~~G~~gILp~H~p~i~~L~~G~i~i~~~~--~~~~~~~V~gG~~~v~~~~v~ 80 (135)
T Consensus 1 M~~t~~l~IVTPe~~v~~~ev~~V~vPg~eG~~GILp~Haplit~L~~G~v~v~~~~~~~~~~~~~V~GGfveV~~n~vt 80 (112)
T PRK01474 1 MNETILVKIITPLSIAFEKQAKMVTMPGEEGMFGVLPSHVPMIVSLKAGLVQVYIDDMHKPENTYLISGGVTEVTGSYIN 80 (112)
T ss_pred CCCCEEEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEECCCEEEECCCEEE
T ss_conf 99835999999980477136579999887507002678611165531858999986899947999987869998199899
Q ss_pred EEEECCEEHHHCCHHHHHHHHHHHHHHHHHC
Q ss_conf 9981122076859999999999999996507
Q gi|254780614|r 81 VLSETILPMDNACLQALEKRIDEVCSDLNNI 111 (135)
Q Consensus 81 Il~~~a~~~~~iD~~~a~~~~e~a~~~l~~~ 111 (135)
T Consensus 81 ILad~A~~~~did~~~~~~~~~~ae~~L~~~ 111 (112)
T PRK01474 81 IATETAINVTNLSEAEIATKLLDLQKTLSDQ 111 (112)
T ss_pred EEEHHEEECCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 9933308904599999999999999987547