HHsearch alignment for GI: 254780614 and conserved domain: PRK13442

>PRK13442 atpC F0F1 ATP synthase subunit epsilon; Provisional.
Probab=99.95  E-value=2.5e-27  Score=191.31  Aligned_cols=89  Identities=34%  Similarity=0.442  Sum_probs=87.1

Q ss_pred             CEEEEEEECCCCEEECCEEEEEEEEECCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCCEEEEECCEEEEEEE
Q ss_conf             40269998488637522131999960573357768980026670688079962688403542267569994996999981
Q gi|254780614|r    5 NDLHFELVSPEKCVFSGEVQSVVLPSELGDITVLVGHAPVLTTIKSGIVTISLSCEEIHRYVVIGGICDIVPSHCTVLSE   84 (135)
Q Consensus         5 ~~~~l~ivtP~~~i~~~~v~~v~~p~~~G~~gILp~H~p~i~~L~~G~i~i~~~~~~~~~~~V~gG~~~v~~~~v~Il~~   84 (135)
T Consensus         3 ~t~~l~IvTPe~~~~~gev~~v~~p~~~G~~gILp~H~p~it~L~~G~v~i~~~~g~~~~~~v~gGf~eV~~n~vtILad   82 (91)
T PRK13442          3 ATLHVNIVAADHEVWSGEATMVVARTTEGDIGVLPGHEPLLGVLASGTVTIVKSGGGRISAAVDGGFISVANNKVSVLAE   82 (91)
T ss_pred             CEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEECCEEEEEECCEEEEEEC
T ss_conf             48999999798519954648999988865720568982029998163899998999699999976499998999999976


Q ss_pred             CCEEHHHCC
Q ss_conf             122076859
Q gi|254780614|r   85 TILPMDNAC   93 (135)
Q Consensus        85 ~a~~~~~iD   93 (135)
T Consensus        83 ~ae~~~eID   91 (91)
T PRK13442         83 RAELVQEID   91 (91)
T ss_pred             EEECHHHCC
T ss_conf             039478799