HHsearch alignment for GI: 254780614 and conserved domain: PRK13448
>PRK13448 atpC F0F1 ATP synthase subunit epsilon; Provisional.
Probab=100.00 E-value=1.6e-33 Score=230.11 Aligned_cols=129 Identities=31% Similarity=0.522 Sum_probs=114.9
Q ss_pred CCEEEEEEECCCCEEECCEEEEEEEEECCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCCEEEEECCEEEEEE
Q ss_conf 44026999848863752213199996057335776898002667068807996268840354226756999499699998
Q gi|254780614|r 4 VNDLHFELVSPEKCVFSGEVQSVVLPSELGDITVLVGHAPVLTTIKSGIVTISLSCEEIHRYVVIGGICDIVPSHCTVLS 83 (135)
Q Consensus 4 ~~~~~l~ivtP~~~i~~~~v~~v~~p~~~G~~gILp~H~p~i~~L~~G~i~i~~~~~~~~~~~V~gG~~~v~~~~v~Il~ 83 (135)
T Consensus 1 M~tf~leIVTPe~~v~~~ev~~V~~p~~~Ge~GIL~~H~Plit~L~~G~v~i~~-~~~~~~~~v~GGf~eV~~~~v~ILa 79 (135)
T PRK13448 1 MATFHFDLVSPEKLAFSGEVDQVDIPGVEGDFGVLAGHAPVVAVIRPGILTVTA-GGNQQKIVVLGGLAEVSEKGLTVLA 79 (135)
T ss_pred CCEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCHHHEEEECCEEEEEEE-CCEEEEEEECCEEEEEECCEEEEEE
T ss_conf 972899999898518952679999957804722357874034677465899998-9908999996419999799999997
Q ss_pred ECCEEHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 112207685999999999999999650788899999999999999998860
Q gi|254780614|r 84 ETILPMDNACLQALEKRIDEVCSDLNNICDVDQRFQMEQLLVDLSCLRRRI 134 (135)
Q Consensus 84 ~~a~~~~~iD~~~a~~~~e~a~~~l~~~~~~~~~~~~~~~~~~l~~~r~~~ 134 (135)
T Consensus 80 e~Ae~~~eID~~~a~~~~erAe~~L~~~~~d~~-~ra~~~le~~~~l~~~l 129 (135)
T PRK13448 80 DVATSVADLDLAQFAATIAEMEAQLAGKVGDEL-DRAIERLDHFKSIQHQL 129 (135)
T ss_pred EEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHHHHHHHHHHHH
T ss_conf 166814458999999999999999754880089-99999999999999998