HHsearch alignment for GI: 254780614 and conserved domain: PRK13449

>PRK13449 atpC F0F1 ATP synthase subunit epsilon; Provisional.
Probab=99.93  E-value=1.5e-25  Score=180.19  Aligned_cols=86  Identities=41%  Similarity=0.611  Sum_probs=80.3

Q ss_pred             CCEEEEEEECCCCEEECCEEEEEEEEECCCEEEECCCCCEEEEECCCCEEEEEECCCC-EEEEECCCCEEEEECCEEEEE
Q ss_conf             4402699984886375221319999605733577689800266706880799626884-035422675699949969999
Q gi|254780614|r    4 VNDLHFELVSPEKCVFSGEVQSVVLPSELGDITVLVGHAPVLTTIKSGIVTISLSCEE-IHRYVVIGGICDIVPSHCTVL   82 (135)
Q Consensus         4 ~~~~~l~ivtP~~~i~~~~v~~v~~p~~~G~~gILp~H~p~i~~L~~G~i~i~~~~~~-~~~~~V~gG~~~v~~~~v~Il   82 (135)
T Consensus         1 M~~l~leiVTPe~~v~~g~v~~V~~p~~~G~~GILp~H~Plit~L~~G~v~i~~~~g~~~~~~~v~gGf~eV~~n~vtIL   80 (88)
T PRK13449          1 MAKLHFELVTPERLLRSGEVHMVVVPGTEGDFGVLAGHAPFMTTLRDGEVTVYSSEGAKPEVIHVQGGFAEVNEKGLTIL   80 (88)
T ss_pred             CCEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEEECCCEEEEECCEEEEE
T ss_conf             97479999999824886278899997782461125898200888648589999969987999999764999979999999


Q ss_pred             EECCEEH
Q ss_conf             8112207
Q gi|254780614|r   83 SETILPM   89 (135)
Q Consensus        83 ~~~a~~~   89 (135)
T Consensus        81 ae~Ae~a   87 (88)
T PRK13449         81 AEHAVEA   87 (88)
T ss_pred             EHEEEEC
T ss_conf             7503996