HHsearch alignment for GI: 254780614 and conserved domain: pfam00401
>pfam00401 ATP-synt_DE ATP synthase, Delta/Epsilon chain, long alpha-helix domain. Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. This subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).
Probab=93.96 E-value=0.13 Score=30.78 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=28.9
Q ss_pred HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 685999999999999999650788899999999999999998860
Q gi|254780614|r 90 DNACLQALEKRIDEVCSDLNNICDVDQRFQMEQLLVDLSCLRRRI 134 (135)
Q Consensus 90 ~~iD~~~a~~~~e~a~~~l~~~~~~~~~~~~~~~~~~l~~~r~~~ 134 (135)
T Consensus 1 ~~ID~~~A~~a~~~Ae~~L~~~~~~~e~~---~A~~~L~rA~aRl 42 (48)
T pfam00401 1 EDIDEARAEEAKERAEEALAKAEGDKEYI---EAQAALKRARARL 42 (48)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHHHH
T ss_conf 94489999999999999997422127899---9999999999999