HHsearch alignment for GI: 254780614 and conserved domain: pfam00401

>pfam00401 ATP-synt_DE ATP synthase, Delta/Epsilon chain, long alpha-helix domain. Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. This subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).
Probab=93.96  E-value=0.13  Score=30.78  Aligned_cols=42  Identities=12%  Similarity=0.071  Sum_probs=28.9

Q ss_pred             HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             685999999999999999650788899999999999999998860
Q gi|254780614|r   90 DNACLQALEKRIDEVCSDLNNICDVDQRFQMEQLLVDLSCLRRRI  134 (135)
Q Consensus        90 ~~iD~~~a~~~~e~a~~~l~~~~~~~~~~~~~~~~~~l~~~r~~~  134 (135)
T Consensus         1 ~~ID~~~A~~a~~~Ae~~L~~~~~~~e~~---~A~~~L~rA~aRl   42 (48)
T pfam00401         1 EDIDEARAEEAKERAEEALAKAEGDKEYI---EAQAALKRARARL   42 (48)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHHHH
T ss_conf             94489999999999999997422127899---9999999999999