HHSEARCH alignment of GI: 254780614 and SCOP domain: d2jdih2

Alignment

Probab=99.83  E-value=6.5e-23  Score=160.91  Aligned_cols=83  Identities=25%  Similarity=0.536  Sum_probs=76.5

Q ss_pred             EEEEECCCCEEEC-CEEEEEEEEECCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEC-CEEEEEEEC
Q ss_conf             6999848863752-21319999605733577689800266706880799626884035422675699949-969999811
Q gi|254780614|r    8 HFELVSPEKCVFS-GEVQSVVLPSELGDITVLVGHAPVLTTIKSGIVTISLSCEEIHRYVVIGGICDIVP-SHCTVLSET   85 (135)
Q Consensus         8 ~l~ivtP~~~i~~-~~v~~v~~p~~~G~~gILp~H~p~i~~L~~G~i~i~~~~~~~~~~~V~gG~~~v~~-~~v~Il~~~   85 (135)
                      .|+|+||++.+|+ ++|++|++|+.+|+|||||||+|+++.|+||.++++.++++++.|+|+|||++|.+ +.|+||++.
T Consensus         1 sl~i~TP~~~~~~~~~v~~V~~p~~~G~~gIL~~H~p~i~~L~~G~l~i~~~~g~~~~~~v~gGf~eV~~~~~v~Ilae~   80 (85)
T d2jdih2           1 SFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTVNADSSVQLLAEE   80 (85)
T ss_dssp             CCCEECSSCEEEC-----CCCCCC-----------------CCSBCCCC----------CBCSBC---------CEEBSS
T ss_pred             CEEEECCCCEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEECCEEEEEECCCCEEEEEECCCEEEEECCCEEEEEEEE
T ss_conf             91999898016878718999997783567797898251124207789999989959999997985999689879999656


Q ss_pred             CEEHH
Q ss_conf             22076
Q gi|254780614|r   86 ILPMD   90 (135)
Q Consensus        86 a~~~~   90 (135)
                      |+..|
T Consensus        81 A~~iD   85 (85)
T d2jdih2          81 AVTLD   85 (85)
T ss_dssp             BCCSS
T ss_pred             EEECC
T ss_conf             19394

SCOP domain information

class: All beta proteins
fold: Epsilon subunit of F1F0-ATP synthase N-terminal domain
superfamily: Epsilon subunit of F1F0-ATP synthase N-terminal domain
family: Epsilon subunit of F1F0-ATP synthase N-terminal domain
domain: Epsilon subunit of F1F0-ATP synthase N-terminal domain
species: Cow (Bos taurus) [TaxId: 9913]