HHsearch alignment for GI: 254780615 and conserved domain: COG5635
>COG5635 Predicted NTPase (NACHT family) [Signal transduction mechanisms].
Probab=92.70 E-value=0.12 Score=29.71 Aligned_cols=53 Identities=19% Similarity=0.277 Sum_probs=43.4
Q ss_pred CCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC---CCCEEEEEEC
Q ss_conf 2311002355702154100367566662489999999885057---8852687621
Q gi|254780615|r 135 TGIKVIDLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAH---GGYSVFAGVG 187 (478)
Q Consensus 135 TGIkaID~l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~---~~v~V~~~iG 187 (478)
T Consensus 208 ~~~~~~~~~~~~~~~~~~~Ilg~pGsGKTtfl~~lA~~~~~~~~~~~~vpi~~~l~ 263 (824)
T COG5635 208 DDQDALPGLEALEKYAKLLILGAPGSGKTTFLQRLALWLAQRTLEPEDVPIFLLLN 263 (824)
T ss_pred CHHHHHHHCCHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
T ss_conf 11234610035866523334468887626799999999741525665677344423