HHsearch alignment for GI: 254780615 and conserved domain: KOG0054

Probab=90.25  E-value=0.17  Score=28.63  Aligned_cols=118  Identities=22%  Similarity=0.328  Sum_probs=70.4

Q ss_pred             CCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE---EECCCH-------HH--------HHHHH
Q ss_conf             3110023557021541003675666624899999998850578852687---621643-------45--------99999
Q gi|254780615|r  136 GIKVIDLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFA---GVGERT-------RE--------GNDLY  197 (478)
Q Consensus       136 GIkaID~l~pig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~---~iGER~-------rE--------v~e~~  197 (478)
T Consensus       536 tL~dIn--~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gs~aYv~Q~pWI~ngTvreNILFG~~~d~~rY  613 (1381)
T KOG0054         536 TLKDIN--FEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNGTVRENILFGSPYDEERY  613 (1381)
T ss_pred             CCCCEE--EEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEEEECCCCHHHCCCHHHHHCCCCCCCHHHH
T ss_conf             301415--896289889998999888899999996587556755998474898666556417856675006870359999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECH
Q ss_conf             985424420012223444332316999717668967877777778776899986699679997155
Q gi|254780615|r  198 HEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGLTVAEHFRDQGQDVLFFVDNI  263 (478)
Q Consensus       198 ~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~~~a~tiAEyfrd~g~dVll~~Dsl  263 (478)
T Consensus       614 ~~Vi~aC~--L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsL---ARAVY---~~adIYLLDDpl  671 (1381)
T KOG0054         614 DKVIKACA--LKKDLEILPFGDLTEIGERGINLSGGQKQRISL---ARAVY---QDADIYLLDDPL  671 (1381)
T ss_pred             HHHHHHCC--CHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHH---HHHHH---CCCCEEEECCCC
T ss_conf             99999706--776797468987535778862776769999999---99986---579989887963