HHsearch alignment for GI: 254780615 and conserved domain: KOG1433
>KOG1433 consensus.
Probab=90.56 E-value=1.1 Score=23.45 Aligned_cols=121 Identities=21% Similarity=0.173 Sum_probs=66.4
Q ss_pred HHHCCCCCCCCCCCCCCCCCCC--CCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEE-EEC-CCHHHHHHHHHH
Q ss_conf 0000134200023110023557--021541003675666624899999998850578852687-621-643459999998
Q gi|254780615|r 124 TEQSTDASILTTGIKVIDLISP--YQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFA-GVG-ERTREGNDLYHE 199 (478)
Q Consensus 124 ~~R~~i~e~L~TGIkaID~l~p--ig~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~-~iG-ER~rEv~e~~~e 199 (478)
T Consensus 84 ~~~~~~~~~l~Tg~~~lD~lL~gGi~~g~~TEi~G~p~~GKtQlc~~~~v~~-~gge~~~l~IDs~s~~~~~~~~~ia~~ 162 (326)
T KOG1433 84 LQLRSELGFLSTGSKALDKLLGGGIETGSLTELVGPPGSGKTQLCHTLAVTC-GGGEGKVLYIDTESTFRLERLTEIAGR 162 (326)
T ss_pred HHHHCCCEEECCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHC-CCCCCEEEEEECCHHCCCCHHHHHHHH
T ss_conf 9861676254155055667742675558356885589844778888998870-687511899952111033211356666
Q ss_pred HHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH---HHHHHHHHHHHHCCCCEEEEEECHHH
Q ss_conf 5424420012223444332316999717668967877777---77877689998669967999715599
Q gi|254780615|r 200 MIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVA---LTGLTVAEHFRDQGQDVLFFVDNIFR 265 (478)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~---~~a~tiAEyfrd~g~dVll~~Dsltr 265 (478)
T Consensus 163 ~~~-------------~~~~-------~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~l~~vds~ta 211 (326)
T KOG1433 163 SGL-------------RGRD-------TLSNLMLARAYNLDHQLQLIQEAEIMINQSRVKLLIVDSATA 211 (326)
T ss_pred HHH-------------HHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 303-------------0677-------888889999985666777799999986203116999413454