HHsearch alignment for GI: 254780615 and conserved domain: PRK00889

Probab=92.85  E-value=0.7  Score=24.67  Aligned_cols=92  Identities=23%  Similarity=0.198  Sum_probs=60.9

Q ss_pred             CCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf             21541003675666624899999998850578852687621643459999998542442001222344433231699971
Q gi|254780615|r  147 QKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYG  226 (478)
Q Consensus       147 g~Gqr~gIfgg~GvGKT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~  226 (478)
T Consensus         2 ~kg~viWltGlsgSGKTTia~~l~~~L~~~--~~~~~~LDGD~lR---~~l~----~~----------------------   50 (175)
T PRK00889          2 QRGVTVWFTGLSGAGKTTISHALAEKLRAR--GYPVEVLDGDIVR---TNLS----KG----------------------   50 (175)
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEECCHHHH---HHHC----CC----------------------
T ss_conf             988899988989999999999999999986--9967997768888---7536----78----------------------


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHH
Q ss_conf             76689678777777787768999866996799971559998760
Q gi|254780615|r  227 QMNEPPGARSRVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAN  270 (478)
Q Consensus       227 ~~~~~~~~r~~~~~~a~tiAEyfrd~g~dVll~~Dsltr~a~A~  270 (478)
T Consensus        51 -lgfs~~dR~~n~~r~~~la~~l~~~g~~vIvs~isp~~~~R~~   93 (175)
T PRK00889         51 -LGFSKEDRDTNIRRIGFVAHLLTRHGVIVLVSAISPYRETREE   93 (175)
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH
T ss_conf             -8989899999999999999999818986888504799999999