HHsearch alignment for GI: 254780615 and conserved domain: PRK02118
>PRK02118 V-type ATP synthase subunit B; Provisional.
Probab=100.00 E-value=0 Score=823.21 Aligned_cols=420 Identities=23% Similarity=0.326 Sum_probs=381.6
Q ss_pred CCCCEEEEEEECCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCEEEEEC
Q ss_conf 53413899995578999816665231418998169955999999870898799998148788878888897798489885
Q gi|254780615|r 7 TESVGRIQQIMGAVVDVVFVNSLPPIFSSLETSDKGSRIVFEVVQHLGEKTVRCIAMSRTDGLSRGDCVIDTGTQITVPV 86 (478)
Q Consensus 7 ~~~~GrV~~V~G~vvev~g~~~~~~i~~~i~~~~~g~~i~~EVV~~l~e~~V~~i~l~~t~GI~~G~~V~~tg~~l~VpV 86 (478)
T Consensus 2 ~k~yg~V~~I~GplI~v~~~~~~~gElv~I~~--~~~~~~gEVI~~-~~d~v~iqvfe~T~Gi~~G~~V~~tG~~l~V~v 78 (432)
T PRK02118 2 QKIYTKITSIKGNLITVEAEGVGYGELATVER--KGRSSLASVLKL-DGDKVTLQVFGGTSGISTGDEVVFLGRPMQVTF 78 (432)
T ss_pred CCCCCEEEEEECCEEEEEECCCCCCCEEEEEC--CCCEEEEEEEEE-ECCEEEEEECCCCCCCCCCCEEEECCCCCEEEE
T ss_conf 72214699998838999978898787899984--997799999998-199899998469878999999996899767882
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHH
Q ss_conf 92376558878752301678753001100234544410000134200023110023557021541003675666624899
Q gi|254780615|r 87 GEATLGRIMNVIGEPVDDQGAIISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGLFGGAGVGKTVLI 166 (478)
Q Consensus 87 G~~lLGRViD~lG~PLDg~g~i~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gqr~gIfgg~GvGKT~l~ 166 (478)
T Consensus 79 g~~lLGRV~DglGrPiDggp~~~-~~~~~i~~~~inP~~R~~p~e~l~TGI~aID~l~~l~rGQKi~IFsgsG~gks~L~ 157 (432)
T PRK02118 79 SDNLLGRRFNGTGKPIDGGPELE-GEPIEIGGPSVNPVKRIVPREMIRTGIPMIDVFNTLVKSQKIPIFSSSGEPYNALL 157 (432)
T ss_pred CHHHCCCEECCCCCCCCCCCCCC-CCEEECCCCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHH
T ss_conf 86543786447676158998788-98861369998964206887677889678542367405856987447999763999
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999885057885268762164345999999854244200122234443323169997176689678777777787768
Q gi|254780615|r 167 MELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGLTVA 246 (478)
Q Consensus 167 ~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~~~a~tiA 246 (478)
T Consensus 158 ~~Ia~~---a~~dvvV~~~iGer~~e~~~f~~~~~~------------~~~l~rtvlv~~ts~~p~~~R~~~~~~altiA 222 (432)
T PRK02118 158 ARIALQ---AEADIIILGGMGLTFDDYLFFKDEFEK------------AGALDRTVMFVHTAVDPPVECLLVPDMALAVA 222 (432)
T ss_pred HHHHHH---CCCCEEEEECCEEECHHHHHHHHHHHH------------CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 999885---389989640332441258999998750------------68777079983477789899877888888899
Q ss_pred HHHH-HCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCC-CCCEEEEEEEEECCCCCCC
Q ss_conf 9998-6699679997155999876012455311441011012235666578887631777-6532566654304766441
Q gi|254780615|r 247 EHFR-DQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTTL-KGSITSVQAIYVPADDLTD 324 (478)
Q Consensus 247 Eyfr-d~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag~~~-~GSIT~~~tV~~~~dD~~d 324 (478)
T Consensus 223 Eyfr~d~G~~VLli~DdlTr~A~A~REIs~~~ge~P~r~GYP~~l~s~La~l~ERAg~~~~~GSIT~i~~v~~p~dD~t~ 302 (432)
T PRK02118 223 EKFAVEEGKKVLVLLTDMTNFADALKEISITMDQIPSNRGYPGSLYSDLAKRYEKAVDFADGGSITIIAVTTMPGDDITH 302 (432)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCC
T ss_conf 99987459729999766788777887898754899987786953999999999834689998026899999757877777
Q ss_pred HHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCEECC----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 058999975034256411566318867532235543111620128----9999999999999998998999999736556
Q gi|254780615|r 325 PAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLEIDIVG----QEHYDVARRVQEILQRYKSLQDIIAILGMDE 400 (478)
Q Consensus 325 pi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~~~~~i~~----~~h~~~a~~~r~~l~~y~el~~~i~~~g~~~ 400 (478)
T Consensus 303 Pi~d~t~~ItdGqIvLsr~--------~id~l~SlSRl~~-~~ig~~tr~dh~~~~~~l~~~ya~~~~~~~~~~~~~--~ 371 (432)
T PRK02118 303 PVPDNTGYITEGQFYLKRG--------RIDPFGSLSRLKQ-LVIGKKTREDHGDLMNAMIRLYADSRKAKEKMAMGF--K 371 (432)
T ss_pred CHHHHHHHHHCCEEEEECC--------CCCCCCCHHHHHH-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
T ss_conf 5688999985776885068--------7576443777765-656542499999999999999986557999999976--4
Q ss_pred CCHHHHHHHHHHHHHH-HHHCCCCCEEECCCCCCCEEECHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHH
Q ss_conf 9988999999999999-9834997110000578973615999999999997676446897897641899999887
Q gi|254780615|r 401 LSEEDKLVVARARKLE-RFMSQPFHVAESFTGLPGKFVSLEETIRGFKGLVQGEYDHLPELAFYMVGSIDEAVKK 474 (478)
Q Consensus 401 l~~~~~~~i~r~~~i~-~fL~Qp~~~~e~ft~~~g~~v~~~eti~~~~~il~g~~d~~pe~~~~~~g~i~e~~~k 474 (478)
T Consensus 372 ls~~d~~~l~f~~~fe~~f~~~~~~------------~~~~~~ld~~w~~l~----~~~~~~~~~~~--~~~~~~ 428 (432)
T PRK02118 372 LSNWDEKLLAFSELFESRLMDLEVN------------IPLEEALDLGWKILA----QCFTPEEVGIK--EQLIDK 428 (432)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCC------------CCHHHHHHHHHHHHH----HCCHHHHHCCC--HHHHHH
T ss_conf 5987899999999999997357899------------658999999999998----76999882799--999987