HHsearch alignment for GI: 254780615 and conserved domain: PRK06315
>PRK06315 type III secretion system ATPase; Provisional.
Probab=100.00 E-value=0 Score=958.85 Aligned_cols=422 Identities=29% Similarity=0.455 Sum_probs=396.9
Q ss_pred CCCCCCCCEEEEEEECCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCEE
Q ss_conf 64565341389999557899981666523141899816995599999987089879999814878887888889779848
Q gi|254780615|r 3 TKAKTESVGRIQQIMGAVVDVVFVNSLPPIFSSLETSDKGSRIVFEVVQHLGEKTVRCIAMSRTDGLSRGDCVIDTGTQI 82 (478)
Q Consensus 3 ~~~~~~~~GrV~~V~G~vvev~g~~~~~~i~~~i~~~~~g~~i~~EVV~~l~e~~V~~i~l~~t~GI~~G~~V~~tg~~l 82 (478)
T Consensus 17 ~~~~~~~~GrV~~v~G~~ie~~g~~~~iGelc~I~~~-~~~~~~aEVVgf-~~~~~~l~p~~~~~Gi~~G~~V~~~g~~~ 94 (442)
T PRK06315 17 DVQLTTVVGRITEVVGMLIKAVVPDVRVGEVCLVKRH-GMEPLVTEVVGF-TQNFVFLSPLGELTGVSPSSEVIPTGLPL 94 (442)
T ss_pred CCCCCEEEEEEEEEEEEEEEEEECCCCCCCEEEEEEC-CCCEEEEEEEEE-CCCEEEEEECCCCCCCCCCCEEEECCCCC
T ss_conf 3886213579999997899998678986786899918-997788999998-49979999877876789999999689987
Q ss_pred EEECCHHHHHHHHHHHHHHCCC--CCCC-CCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf 9885923765588787523016--7875-300110023454441000013420002311002355702154100367566
Q gi|254780615|r 83 TVPVGEATLGRIMNVIGEPVDD--QGAI-ISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGLFGGAG 159 (478)
Q Consensus 83 ~VpVG~~lLGRViD~lG~PLDg--~g~i-~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gqr~gIfgg~G 159 (478)
T Consensus 95 ~vpvg~~lLGRViD~~G~PiDg~~~gp~~~~~~~~pi~~~~p~p~~R~~i~epl~TGIraID~llpig~GQR~gIfagsG 174 (442)
T PRK06315 95 HIRAGNGLLGRVLNGLGEPIDTETKGPLENVDETYPIFRAPPDPLHRAKLRTILSTGVRCIDGMLTVARGQRIGIFAGAG 174 (442)
T ss_pred EEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCC
T ss_conf 78727151378888887766787778876776311324789693430787875336853001127702377764038999
Q ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
Q ss_conf 66248999999988505788526876216434599999985424420012223444332316999717668967877777
Q gi|254780615|r 160 VGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVA 239 (478)
Q Consensus 160 vGKT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~ 239 (478)
T Consensus 175 vGKs~Ll~~i~~~~~--~adv~V~~lIGeRgrEv~efie~~~------------~~~~l~rsvvV~atsd~p~~~R~~a~ 240 (442)
T PRK06315 175 VGKSSLLGMIARNAE--EADVNVIALIGERGREVREFIEGDL------------GEEGMKRSVIVVSTSDQSSQLRLNAA 240 (442)
T ss_pred CCHHHHHHHHHHHHC--CCCCEEEEEECCCCHHHHHHHHHHH------------CCCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 988899999997440--3893499995511379999999752------------01452133999617999878875558
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECC
Q ss_conf 77877689998669967999715599987601245531144101101223566657888763177765325666543047
Q gi|254780615|r 240 LTGLTVAEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTTLKGSITSVQAIYVPA 319 (478)
Q Consensus 240 ~~a~tiAEyfrd~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag~~~~GSIT~~~tV~~~~ 319 (478)
T Consensus 241 ~~A~aiAEyFrd~G~~VLl~~DslTR~A~A~REi~l~~gepP~~~GYppsvf~~l~~l~ERag~~~~GSITa~~tVl~~g 320 (442)
T PRK06315 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERAGASDKGTITAFYTVLVAG 320 (442)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCC
T ss_conf 87778999998689948999437028888999999755899987786833998878888722488997456533465158
Q ss_pred CCCCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 66441058999975034256411566318867532235543111620128999999999999999899899999973655
Q gi|254780615|r 320 DDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLEIDIVGQEHYDVARRVQEILQRYKSLQDIIAILGMD 399 (478)
Q Consensus 320 dD~~dpi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~~~~~i~~~~h~~~a~~~r~~l~~y~el~~~i~~~g~~ 399 (478)
T Consensus 321 dD~~dPi~d~~~~ilDGhivLsr~la~~g~yPAIDvl~S~SR~~~-~v~~~~h~~~a~~~r~~la~y~e~edli~iG~y~ 399 (442)
T PRK06315 321 DDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLT-AIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYR 399 (442)
T ss_pred CCCCCCCHHHHHHHCCCEEEECHHHHHCCCCCCCCCCCCHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 876787367778760616998587986699997187504533661-1057999999999999999889999999962987
Q ss_pred CCCH-HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECHHHHHHHHHHHHC
Q ss_conf 6998-899999999999998349971100005789736159999999999976
Q gi|254780615|r 400 ELSE-EDKLVVARARKLERFMSQPFHVAESFTGLPGKFVSLEETIRGFKGLVQ 451 (478)
Q Consensus 400 ~l~~-~~~~~i~r~~~i~~fL~Qp~~~~e~ft~~~g~~v~~~eti~~~~~il~ 451 (478)
T Consensus 400 ~g~d~~~d~ai~~~~~i~~fL~Q~~~e----------~~~~~~~~~~l~~i~~ 442 (442)
T PRK06315 400 RGSDREVDFAIDHIDKLNRFLKQDIHE----------KTNYEEAAQQLRAIFR 442 (442)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCC----------CCCHHHHHHHHHHHHC
T ss_conf 899988999999799999982899889----------9699999999999759