HHsearch alignment for GI: 254780615 and conserved domain: PRK06820

>PRK06820 type III secretion system ATPase; Validated.
Probab=100.00  E-value=0  Score=938.00  Aligned_cols=419  Identities=26%  Similarity=0.405  Sum_probs=390.9

Q ss_pred             CCCCCCEEEEEEECCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCEEEE
Q ss_conf             56534138999955789998166652314189981699559999998708987999981487888788888977984898
Q gi|254780615|r    5 AKTESVGRIQQIMGAVVDVVFVNSLPPIFSSLETSDKGSRIVFEVVQHLGEKTVRCIAMSRTDGLSRGDCVIDTGTQITV   84 (478)
Q Consensus         5 ~~~~~~GrV~~V~G~vvev~g~~~~~~i~~~i~~~~~g~~i~~EVV~~l~e~~V~~i~l~~t~GI~~G~~V~~tg~~l~V   84 (478)
T Consensus        25 ~~vr~~G~V~~V~g~iv~~~l~~~~~Gelc~i~--~--~g~~aeVv~~-~~~~v~l~~~~~~~Gi~~G~~V~~tG~~l~V   99 (445)
T PRK06820         25 EGLRYRGPIVEIGPTLLRASLPNVAQGELCRIE--P--QGMLAEVVSI-EQEMALLSPFASSDGLRCGQWVTPLGHMHRV   99 (445)
T ss_pred             CCCEEEEEEEEEECEEEEEECCCCCCCCEEEEE--C--CCEEEEEEEE-ECCEEEEEECCCCCCCCCCCEEEECCCCEEE
T ss_conf             984667699999276999965887848989992--7--9989999998-7897999988788788999999979996088


Q ss_pred             ECCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHH
Q ss_conf             85923765588787523016787530011002345444100001342000231100235570215410036756666248
Q gi|254780615|r   85 PVGEATLGRIMNVIGEPVDDQGAIISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGLFGGAGVGKTV  164 (478)
Q Consensus        85 pVG~~lLGRViD~lG~PLDg~g~i~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gqr~gIfgg~GvGKT~  164 (478)
T Consensus       100 ~VG~~lLGRVvD~lG~PiDgg-~~~~~~~~pi~~~~p~p~~R~~i~~pL~TGIraID~l~pigrGQR~gIfgg~GvGKT~  178 (445)
T PRK06820        100 QVGADLAGRILDGLGAPIDGG-PPLTGQWRELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKST  178 (445)
T ss_pred             ECCCCCCCCEECCCCCCCCCC-CCCCCCEEECCCCCCCCHHCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCH
T ss_conf             728240278706887531899-8877743203589968320268785112685466256774478742110689998122


Q ss_pred             HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             99999998850578852687621643459999998542442001222344433231699971766896787777777877
Q gi|254780615|r  165 LIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGLT  244 (478)
Q Consensus       165 l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~~~a~t  244 (478)
T Consensus       179 Ll~~i~~~---~~adv~V~~~IGeRgrEv~efie~~~------------~~~~~~rtvvV~atsd~p~~~R~~a~~~a~a  243 (445)
T PRK06820        179 LLSMLCAD---SAADVMVLALIGERGREVREFLEQVL------------TPEARARTVVVVATSDRPALERLKGLSTATT  243 (445)
T ss_pred             HHHHHHHH---CCCCEEEEEEEEEECHHHHHHHHHHH------------CCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf             34456530---67887999987441289999999864------------2376110699941676898999999876114


Q ss_pred             HHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCC
Q ss_conf             68999866996799971559998760124553114410110122356665788876317776532566654304766441
Q gi|254780615|r  245 VAEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTTLKGSITSVQAIYVPADDLTD  324 (478)
Q Consensus       245 iAEyfrd~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag~~~~GSIT~~~tV~~~~dD~~d  324 (478)
T Consensus       244 iAEyfrd~Gk~VLli~DslTr~A~A~REisl~~gepP~~~gYp~~vf~~l~~L~ERag~~~~GSITal~~V~~~~dD~td  323 (445)
T PRK06820        244 VAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNSDRGSITAFYTVLVEGDDMNE  323 (445)
T ss_pred             HHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCC
T ss_conf             88999867984899844657888899899986479997677785499888888873047889756778889705887677


Q ss_pred             HHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             05899997503425641156631886753223554311162012899999999999999989989999997365569988
Q gi|254780615|r  325 PAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLEIDIVGQEHYDVARRVQEILQRYKSLQDIIAILGMDELSEE  404 (478)
Q Consensus       325 pi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~~~~~i~~~~h~~~a~~~r~~l~~y~el~~~i~~~g~~~l~~~  404 (478)
T Consensus       324 pi~d~~~silDG~ivLsr~La~~g~yPAIDvl~SvSRv~-~~~~~~~h~~~a~~~r~~la~y~e~e~li~~G~y~~g~d~  402 (445)
T PRK06820        324 PVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIM-PQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDL  402 (445)
T ss_pred             CCHHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCHHHCC-HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf             716767565153899848798669999818740564546-2220299999999999999999999999984787679998


Q ss_pred             -HHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECHHHHHHHHHHHH
Q ss_conf             -9999999999999834997110000578973615999999999997
Q gi|254780615|r  405 -DKLVVARARKLERFMSQPFHVAESFTGLPGKFVSLEETIRGFKGLV  450 (478)
Q Consensus       405 -~~~~i~r~~~i~~fL~Qp~~~~e~ft~~~g~~v~~~eti~~~~~il  450 (478)
T Consensus       403 ~~d~ai~~~~~i~~fL~Q~~~~~~~~-----~~~~~~~~~~~l~~~~  444 (445)
T PRK06820        403 QADEALQRYPAICAFLQQDHSLTRDP-----DTAHLDTTLEHLAQVV  444 (445)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCC-----CCCCHHHHHHHHHHHH
T ss_conf             99999987899999858999888887-----7779899999999863