HHsearch alignment for GI: 254780615 and conserved domain: PRK07165
>PRK07165 F0F1 ATP synthase subunit alpha; Validated.
Probab=100.00 E-value=0 Score=817.43 Aligned_cols=429 Identities=18% Similarity=0.220 Sum_probs=386.8
Q ss_pred EEEEEEECCEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCEEEEECCHHH
Q ss_conf 38999955789998166652314189981699559999998708987999981487888788888977984898859237
Q gi|254780615|r 11 GRIQQIMGAVVDVVFVNSLPPIFSSLETSDKGSRIVFEVVQHLGEKTVRCIAMSRTDGLSRGDCVIDTGTQITVPVGEAT 90 (478)
Q Consensus 11 GrV~~V~G~vvev~g~~~~~~i~~~i~~~~~g~~i~~EVV~~l~e~~V~~i~l~~t~GI~~G~~V~~tg~~l~VpVG~~l 90 (478)
T Consensus 3 pkV~sV~DgIa~V~GL~n~--~~~El~~f~~~~~-v~g~~lnleed~vg~vi~g~~~~i~eGd~V~~Tg~i~~VpVG~~l 79 (507)
T PRK07165 3 PKIKSIFDYIVEVKGEFDY--QQQQVFTLKNNPN-VKLFVISATEDTAYLLINNEKAKIKIGDEIIELNNENKVLTSKEY 79 (507)
T ss_pred CEEEEEECEEEEEECCHHH--CCCCEEEECCCCC-CEEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCEEEEECCCCC
T ss_conf 7089981448999677022--4486699648996-289997255361799998798770489999845985788757664
Q ss_pred HHHHHHHHHHHCCCCCC-----CCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHH
Q ss_conf 65588787523016787-----5300110023454441000013420002311002355702154100367566662489
Q gi|254780615|r 91 LGRIMNVIGEPVDDQGA-----IISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGLFGGAGVGKTVL 165 (478)
Q Consensus 91 LGRViD~lG~PLDg~g~-----i~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gqr~gIfgg~GvGKT~l 165 (478)
T Consensus 80 LGRVVD~LG~pidp~~~~~~~~~~~~~~~pie~~Apgi~~R~~V~ePLqTGIkaID~miPIGRGQRELIiGDrqTGKTaI 159 (507)
T PRK07165 80 FGKIIDIDGNIIYPKAANPLKSEKAYQTSSAFNLAHGLMTVQTLNEQLYTGIVAIDLLIPIGKGQRELIIGDRQTGKTHI 159 (507)
T ss_pred CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHH
T ss_conf 46368899986789898887765433347745579985236767861343467876135556761677735788778899
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 99999988505788526876216434599999985424420012223444332316999717668967877777778776
Q gi|254780615|r 166 IMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGLTV 245 (478)
Q Consensus 166 ~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~~~a~ti 245 (478)
T Consensus 160 AldtIiN-Qk~~~V~cIYVAIGQK~s~Va~iv~~L~~------------~gAm~yTiVV~A~sd~p-~~qylAPy~g~ai 225 (507)
T PRK07165 160 ALNTIIN-QKNRNVKCIYVAIGQKRENLSRIYETLKE------------HDALKNTIIIDAPSTSS-YEQYLAPYVAMAH 225 (507)
T ss_pred HHHHHHH-CCCCCCEEEEEEECCCHHHHHHHHHHHHH------------CCCHHHEEEEECCCCCC-HHHHHHHHHHHHH
T ss_conf 9999984-54689589999831017799999999987------------79756525763157782-7777788888878
Q ss_pred HHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCC-CCCEEEEEEEEECCCCCCC
Q ss_conf 899986699679997155999876012455311441011012235666578887631777-6532566654304766441
Q gi|254780615|r 246 AEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTTL-KGSITSVQAIYVPADDLTD 324 (478)
Q Consensus 246 AEyfrd~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag~~~-~GSIT~~~tV~~~~dD~~d 324 (478)
T Consensus 226 AEyf~-~~~dvLiiyDDLTkhA~AyReisLll~rPPGReayPgdvFy~hsrLLERa~kl~g~gSiTaLPIieT~~gDisa 304 (507)
T PRK07165 226 AENIS-YNDDVLIVFDDLTKHANIYREIALLTNKPVGKEAFPGDIFFAHSKLLERAGKFKNRKSITALPILQTVDNDITS 304 (507)
T ss_pred HHHHH-CCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCC
T ss_conf 89886-46856999647689999999889872799997789960576616888887612699615760178702786224
Q ss_pred HHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 05899997503425641156631886753223554311162012899999999999999989989999997365569988
Q gi|254780615|r 325 PAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLEIDIVGQEHYDVARRVQEILQRYKSLQDIIAILGMDELSEE 404 (478)
Q Consensus 325 pi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~~~~~i~~~~h~~~a~~~r~~l~~y~el~~~i~~~g~~~l~~~ 404 (478)
T Consensus 305 yIpTNviSITDGQI~l~~~Lf~~G~rPAInvglSVSRvG-~~aQ~k~~k~vag~l~l~~aqy~el~~fa~f~-s-dld~~ 381 (507)
T PRK07165 305 LISSNIISITDGQIVTSSELFAQGKLPAIDIDLSVSRTG-SSVQSKNIAKIAKEISKIYRAYKRQLKLSSLD-Y-DLNKE 381 (507)
T ss_pred CCCCCEEEECCCEEEECHHHHHCCCCCCCCCCCEEECCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-CCCHH
T ss_conf 356644774176288517677469886523570065157-68889999998636567899999999998654-5-41899
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECHHHHHHHHHHHHCCCCCCCCHH--HHHHCCCHHH
Q ss_conf 99999999999998349971100005789736159999999999976764468978--9764189999
Q gi|254780615|r 405 DKLVVARARKLERFMSQPFHVAESFTGLPGKFVSLEETIRGFKGLVQGEYDHLPEL--AFYMVGSIDE 470 (478)
Q Consensus 405 ~~~~i~r~~~i~~fL~Qp~~~~e~ft~~~g~~v~~~eti~~~~~il~g~~d~~pe~--~~~~~g~i~e 470 (478)
T Consensus 382 t~~~l~rG~r~~ellkQ~~~----------~p~~~~~qv~~~~~~~~g~lddv~~~~~al~fi~~~~~ 439 (507)
T PRK07165 382 TSDLLSKGKMIEKLFIQKGF----------SLYSYRFILLISKLISWGLLKDVKDEQKALDFIDYLIE 439 (507)
T ss_pred HHHHHHHHHHHHHHHCCCCC----------CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999732899998667788----------98689999999998754654468777999999999986