HHsearch alignment for GI: 254780615 and conserved domain: PRK07721
>PRK07721 fliI flagellum-specific ATP synthase; Validated.
Probab=100.00 E-value=0 Score=965.75 Aligned_cols=424 Identities=26% Similarity=0.428 Sum_probs=402.1
Q ss_pred CCCCCCCCEEEEEEECCEEEEEECCCCCCCCCEEEECC-CCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCE
Q ss_conf 64565341389999557899981666523141899816-99559999998708987999981487888788888977984
Q gi|254780615|r 3 TKAKTESVGRIQQIMGAVVDVVFVNSLPPIFSSLETSD-KGSRIVFEVVQHLGEKTVRCIAMSRTDGLSRGDCVIDTGTQ 81 (478)
Q Consensus 3 ~~~~~~~~GrV~~V~G~vvev~g~~~~~~i~~~i~~~~-~g~~i~~EVV~~l~e~~V~~i~l~~t~GI~~G~~V~~tg~~ 81 (478)
T Consensus 10 ~~~~~~~~GrV~~I~G~lIea~g~~~~iGelc~I~~~~~~g~~i~aEVVgf-~~~~v~l~p~~~~~GI~~G~~V~~~g~~ 88 (435)
T PRK07721 10 TLDPYKRYGKVKRVIGLMIESKGPESSIGDVCYIHTKGKGGKKIKAEVVGF-KDENILLMPYLEAANIAPGSLVEATGEP 88 (435)
T ss_pred CCCCCCCCEEEEEEECEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEE-CCCEEEEEECCCCCCCCCCCEEEECCCC
T ss_conf 279752312899998638999957888434179996479997899999987-6988999987688899999999958997
Q ss_pred EEEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC
Q ss_conf 89885923765588787523016787530011002345444100001342000231100235570215410036756666
Q gi|254780615|r 82 ITVPVGEATLGRIMNVIGEPVDDQGAIISSEKRAIHQPSPSYTEQSTDASILTTGIKVIDLISPYQKGGKIGLFGGAGVG 161 (478)
Q Consensus 82 l~VpVG~~lLGRViD~lG~PLDg~g~i~~~~~~pi~~~~p~~~~R~~i~e~L~TGIkaID~l~pig~Gqr~gIfgg~GvG 161 (478)
T Consensus 89 ~~vpvg~~lLGRV~d~lG~PiDg~~~~~~~~~~~i~~~~pnp~~R~~i~e~l~TGIraID~l~tigkGQRigIf~gsGvG 168 (435)
T PRK07721 89 LRVKVGSGLIGQVVDAFGEPLDGSALPKGLAPVSTDQSPPNPMKRPPIREKMEVGVRAIDSLLTVGKGQRVGIFAGSGVG 168 (435)
T ss_pred CEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCC
T ss_conf 66772753224510456543589888887653525589978501479886303785652264760357541002689987
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 24899999998850578852687621643459999998542442001222344433231699971766896787777777
Q gi|254780615|r 162 KTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALT 241 (478)
Q Consensus 162 KT~l~~~~i~n~~~~~~~v~V~~~iGER~rEv~e~~~e~~~~~~~~~~~~~~~~~~~~~tv~v~~~~~~~~~~r~~~~~~ 241 (478)
T Consensus 169 Ks~Ll~~iar~---~~adv~V~~liGeR~rEv~efie~~l------------~~~~l~rsvvv~atsd~p~~~R~~a~~~ 233 (435)
T PRK07721 169 KSTLMGMIARQ---TSADLNVIALIGERGREVREFIERDL------------GEEGLKRSIVVVATSDQPALMRIKGAYT 233 (435)
T ss_pred HHHHHHHHHHH---HCCCEEEEEEECCCHHHHHHHHHHHH------------CCCCCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 89999999887---44882589993320289999999752------------2155532399994388999999999999
Q ss_pred HHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCC
Q ss_conf 87768999866996799971559998760124553114410110122356665788876317776532566654304766
Q gi|254780615|r 242 GLTVAEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERITTTLKGSITSVQAIYVPADD 321 (478)
Q Consensus 242 a~tiAEyfrd~g~dVll~~Dsltr~a~A~rEisl~~g~~P~~~gYp~~~f~~~~~l~ERag~~~~GSIT~~~tV~~~~dD 321 (478)
T Consensus 234 a~tiAEyfrd~G~~VLl~~Dsltr~A~A~REisl~~ge~P~~~gYppsvf~~l~~l~ERag~~~~GSIT~i~~V~~~gdD 313 (435)
T PRK07721 234 ATAIAEYFRDKGQNVMLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFAILPKLLERTGTNESGTITAFYTVLVDGDD 313 (435)
T ss_pred HHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCC
T ss_conf 88899999967997899516388999999999985489998667784599887888885137999745777545047986
Q ss_pred CCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 44105899997503425641156631886753223554311162012899999999999999989989999997365569
Q gi|254780615|r 322 LTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSMLEIDIVGQEHYDVARRVQEILQRYKSLQDIIAILGMDEL 401 (478)
Q Consensus 322 ~~dpi~~~~~si~Dg~ivLsr~la~~g~~PAId~~~S~Sr~~~~~i~~~~h~~~a~~~r~~l~~y~el~~~i~~~g~~~l 401 (478)
T Consensus 314 ~~dPi~d~~~~ilDG~ivLsr~la~~g~yPAIDvl~S~SR~~~-~i~~~~h~~~a~~~r~~la~y~e~~~li~~g~y~~g 392 (435)
T PRK07721 314 MNEPIADTVRGILDGHFVLDRALANKGQFPAVNVLKSISRVMS-NIATKEHKEAANRFRELLSTYQNSEDLINIGAYKRG 392 (435)
T ss_pred CCCCCHHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 6677168787771617998688986699998088616654322-230299999999999999988999999997487679
Q ss_pred CHHH-HHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECHHHHHHHHHHHHCCC
Q ss_conf 9889-999999999999834997110000578973615999999999997676
Q gi|254780615|r 402 SEED-KLVVARARKLERFMSQPFHVAESFTGLPGKFVSLEETIRGFKGLVQGE 453 (478)
Q Consensus 402 ~~~~-~~~i~r~~~i~~fL~Qp~~~~e~ft~~~g~~v~~~eti~~~~~il~g~ 453 (478)
T Consensus 393 ~d~~~D~ai~~~~~i~~fL~Q~~~e----------~~~~~~~~~~l~~l~~~~ 435 (435)
T PRK07721 393 SSREIDEAIQFYPQLISFLKQEVDE----------KATLEESIQALKQLTGRE 435 (435)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCC----------CCCHHHHHHHHHHHHCCC
T ss_conf 9988999998689999984899999----------989999999999986779